Protein–RNA interactions for Protein: D3YZU1

Shank1, SH3 and multiple ankyrin repeat domains protein 1, mousemouse

Predictions only

Length 2,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank1D3YZU1 Gm23990-201ENSMUST00000117031 117 ntBASIC1.29□□□□□ -2.2
Shank1D3YZU1 Gm13922-201ENSMUST00000119505 156 ntBASIC1.29□□□□□ -2.2
Shank1D3YZU1 Gm25828-201ENSMUST00000157087 95 ntBASIC1.29□□□□□ -2.2
Shank1D3YZU1 Gm23898-201ENSMUST00000158111 103 ntBASIC1.29□□□□□ -2.2
Shank1D3YZU1 Gm16546-201ENSMUST00000159442 355 ntBASIC1.29□□□□□ -2.2
Shank1D3YZU1 Mir6379-201ENSMUST00000183392 115 ntBASIC1.29□□□□□ -2.2
Shank1D3YZU1 Hspe1-ps2-201ENSMUST00000051437 312 ntBASIC1.29□□□□□ -2.2
Shank1D3YZU1 Snord14a-201ENSMUST00000082807 87 ntBASIC1.29□□□□□ -2.2
Shank1D3YZU1 Pcdh11x-208ENSMUST00000193899 5394 ntAPPRIS ALT2 TSL 5 BASIC1.29□□□□□ -2.2
Shank1D3YZU1 Mir669b-201ENSMUST00000102172 97 ntBASIC1.28□□□□□ -2.2
Shank1D3YZU1 Gm22780-201ENSMUST00000104084 132 ntBASIC1.28□□□□□ -2.2
Shank1D3YZU1 Gm25558-201ENSMUST00000158083 106 ntBASIC1.28□□□□□ -2.2
Shank1D3YZU1 Mir1966-201ENSMUST00000158807 108 ntBASIC1.28□□□□□ -2.2
Shank1D3YZU1 Trav5n-3-201ENSMUST00000164511 270 ntBASIC1.28□□□□□ -2.2
Shank1D3YZU1 Gm25241-201ENSMUST00000174909 84 ntBASIC1.28□□□□□ -2.2
Shank1D3YZU1 Mir3057-201ENSMUST00000175040 91 ntBASIC1.28□□□□□ -2.2
Shank1D3YZU1 Gm26217-201ENSMUST00000175212 84 ntBASIC1.28□□□□□ -2.2
Shank1D3YZU1 mt-Ta-201ENSMUST00000082398 69 ntBASIC1.28□□□□□ -2.2
Shank1D3YZU1 Gm23722-201ENSMUST00000083002 130 ntBASIC1.28□□□□□ -2.2
Shank1D3YZU1 n-R5s183-201ENSMUST00000083939 115 ntBASIC1.28□□□□□ -2.2
Shank1D3YZU1 Arhgap5-201ENSMUST00000110725 5197 ntAPPRIS P1 TSL 1 (best) BASIC1.28□□□□□ -2.2
Shank1D3YZU1 Mir466b-3-201ENSMUST00000103806 81 ntBASIC1.28□□□□□ -2.2
Shank1D3YZU1 Gm11856-201ENSMUST00000118712 276 ntBASIC1.28□□□□□ -2.2
Shank1D3YZU1 Gm26097-201ENSMUST00000179642 93 ntBASIC1.28□□□□□ -2.2
Shank1D3YZU1 Gm23370-201ENSMUST00000199545 130 ntBASIC1.28□□□□□ -2.2
Shank1D3YZU1 Gm44028-201ENSMUST00000205205 355 ntTSL 5 BASIC1.28□□□□□ -2.2
Shank1D3YZU1 Gm23678-201ENSMUST00000083157 107 ntBASIC1.28□□□□□ -2.2
Shank1D3YZU1 Olfr1154-202ENSMUST00000215017 2917 ntAPPRIS P1 TSL 5 BASIC1.28□□□□□ -2.21
Shank1D3YZU1 Gm23558-201ENSMUST00000157823 80 ntBASIC1.27□□□□□ -2.21
Shank1D3YZU1 Gm22606-201ENSMUST00000158290 103 ntBASIC1.27□□□□□ -2.21
Shank1D3YZU1 Gm23208-201ENSMUST00000158666 127 ntBASIC1.27□□□□□ -2.21
Shank1D3YZU1 Gm44338-201ENSMUST00000198614 110 ntBASIC1.27□□□□□ -2.21
Shank1D3YZU1 Gm45544-201ENSMUST00000211130 88 ntBASIC1.27□□□□□ -2.21
Shank1D3YZU1 AC125488.1-201ENSMUST00000219586 212 ntBASIC1.27□□□□□ -2.21
Shank1D3YZU1 AC154282.1-201ENSMUST00000223154 265 ntBASIC1.27□□□□□ -2.21
Shank1D3YZU1 AC158982.2-201ENSMUST00000226283 184 ntBASIC1.27□□□□□ -2.21
Shank1D3YZU1 Gm22850-201ENSMUST00000157714 82 ntBASIC1.27□□□□□ -2.21
Shank1D3YZU1 Gm26029-201ENSMUST00000158659 132 ntBASIC1.27□□□□□ -2.21
Shank1D3YZU1 Gm22699-201ENSMUST00000175376 105 ntBASIC1.27□□□□□ -2.21
Shank1D3YZU1 Mir7663-201ENSMUST00000183950 61 ntBASIC1.27□□□□□ -2.21
Shank1D3YZU1 1700016B01Rik-201ENSMUST00000197688 270 ntTSL 1 (best) BASIC1.27□□□□□ -2.21
Shank1D3YZU1 Gm44464-201ENSMUST00000198010 138 ntBASIC1.27□□□□□ -2.21
Shank1D3YZU1 Gm45027-201ENSMUST00000207081 78 ntTSL 3 BASIC1.27□□□□□ -2.21
Shank1D3YZU1 Mir93-201ENSMUST00000083593 88 ntBASIC1.27□□□□□ -2.21
Shank1D3YZU1 Mir490-201ENSMUST00000093567 84 ntBASIC1.27□□□□□ -2.21
Shank1D3YZU1 AC159625.1-201ENSMUST00000220994 2625 ntBASIC1.26□□□□□ -2.21
Shank1D3YZU1 Gm20477-201ENSMUST00000174028 280 ntBASIC1.26□□□□□ -2.21
Shank1D3YZU1 Mir7683-201ENSMUST00000183842 61 ntBASIC1.26□□□□□ -2.21
Shank1D3YZU1 Gm37693-201ENSMUST00000194562 234 ntBASIC1.26□□□□□ -2.21
Shank1D3YZU1 Gm43602-201ENSMUST00000196772 300 ntBASIC1.26□□□□□ -2.21
Shank1D3YZU1 CT485608.2-201ENSMUST00000227210 291 ntBASIC1.26□□□□□ -2.21
Shank1D3YZU1 Gm22738-201ENSMUST00000083440 147 ntBASIC1.26□□□□□ -2.21
Shank1D3YZU1 Olfr1431-202ENSMUST00000213759 3001 ntAPPRIS P1 TSL 5 BASIC1.26□□□□□ -2.21
Shank1D3YZU1 Gm44578-201ENSMUST00000207236 3835 ntBASIC1.26□□□□□ -2.21
Shank1D3YZU1 Gm25364-201ENSMUST00000158851 107 ntBASIC1.25□□□□□ -2.21
Shank1D3YZU1 Mir3471-1-201ENSMUST00000175139 131 ntBASIC1.25□□□□□ -2.21
Shank1D3YZU1 Gm25994-201ENSMUST00000175392 101 ntBASIC1.25□□□□□ -2.21
Shank1D3YZU1 Gm22929-201ENSMUST00000175517 107 ntBASIC1.25□□□□□ -2.21
Shank1D3YZU1 Gm43749-201ENSMUST00000199345 352 ntBASIC1.25□□□□□ -2.21
Shank1D3YZU1 1700014F14Rik-201ENSMUST00000199566 197 ntTSL 1 (best) BASIC1.25□□□□□ -2.21
Shank1D3YZU1 Gm22704-201ENSMUST00000083027 137 ntBASIC1.25□□□□□ -2.21
Shank1D3YZU1 Gm24345-201ENSMUST00000158706 124 ntBASIC1.25□□□□□ -2.21
Shank1D3YZU1 Gm27934-201ENSMUST00000158795 63 ntBASIC1.25□□□□□ -2.21
Shank1D3YZU1 Gm27511-201ENSMUST00000183502 127 ntBASIC1.25□□□□□ -2.21
Shank1D3YZU1 Gm27248-201ENSMUST00000184004 166 ntBASIC1.25□□□□□ -2.21
Shank1D3YZU1 Gm18665-201ENSMUST00000189783 270 ntBASIC1.25□□□□□ -2.21
Shank1D3YZU1 Gm24805-201ENSMUST00000082931 104 ntBASIC1.25□□□□□ -2.21
Shank1D3YZU1 Mir151-201ENSMUST00000083678 68 ntBASIC1.25□□□□□ -2.21
Shank1D3YZU1 Gm25409-201ENSMUST00000083764 131 ntBASIC1.25□□□□□ -2.21
Shank1D3YZU1 Gm23578-201ENSMUST00000103943 104 ntBASIC1.24□□□□□ -2.21
Shank1D3YZU1 Gm23328-201ENSMUST00000157418 132 ntBASIC1.24□□□□□ -2.21
Shank1D3YZU1 Gm22387-201ENSMUST00000158191 131 ntBASIC1.24□□□□□ -2.21
Shank1D3YZU1 Gm17215-201ENSMUST00000170074 277 ntTSL 3 BASIC1.24□□□□□ -2.21
Shank1D3YZU1 Gm28669-201ENSMUST00000188400 100 ntBASIC1.24□□□□□ -2.21
Shank1D3YZU1 Gm18213-201ENSMUST00000207850 178 ntBASIC1.24□□□□□ -2.21
Shank1D3YZU1 AC150901.1-201ENSMUST00000208407 145 ntBASIC1.24□□□□□ -2.21
Shank1D3YZU1 AC126691.1-201ENSMUST00000226534 202 ntBASIC1.24□□□□□ -2.21
Shank1D3YZU1 Gm23320-201ENSMUST00000104462 127 ntBASIC1.24□□□□□ -2.21
Shank1D3YZU1 Snord90-201ENSMUST00000104568 111 ntBASIC1.24□□□□□ -2.21
Shank1D3YZU1 Rhox11-ps3-201ENSMUST00000121166 233 ntBASIC1.24□□□□□ -2.21
Shank1D3YZU1 Gm14709-201ENSMUST00000121225 304 ntBASIC1.24□□□□□ -2.21
Shank1D3YZU1 Gm23996-201ENSMUST00000158062 131 ntBASIC1.24□□□□□ -2.21
Shank1D3YZU1 Gm24131-201ENSMUST00000158539 107 ntBASIC1.24□□□□□ -2.21
Shank1D3YZU1 Olfr1007-ps1-201ENSMUST00000217468 138 ntBASIC1.24□□□□□ -2.21
Shank1D3YZU1 AC126939.3-201ENSMUST00000226061 166 ntBASIC1.24□□□□□ -2.21
Shank1D3YZU1 Mir201-201ENSMUST00000083470 66 ntBASIC1.24□□□□□ -2.21
Shank1D3YZU1 Mir221-201ENSMUST00000083488 95 ntBASIC1.24□□□□□ -2.21
Shank1D3YZU1 Gm10813-201ENSMUST00000099936 90 ntBASIC1.24□□□□□ -2.21
Shank1D3YZU1 Olfr141-201ENSMUST00000216117 2935 ntAPPRIS P1 TSL 5 BASIC1.23□□□□□ -2.21
Shank1D3YZU1 Traj52-201ENSMUST00000103691 66 ntAPPRIS P1 BASIC1.23□□□□□ -2.21
Shank1D3YZU1 Gm25980-201ENSMUST00000157176 218 ntBASIC1.23□□□□□ -2.21
Shank1D3YZU1 Gm22946-201ENSMUST00000158558 82 ntBASIC1.23□□□□□ -2.21
Shank1D3YZU1 Gm21885-201ENSMUST00000178891 327 ntBASIC1.23□□□□□ -2.21
Shank1D3YZU1 Ighv15-1-201ENSMUST00000194450 276 ntBASIC1.23□□□□□ -2.21
Shank1D3YZU1 Mir196b-201ENSMUST00000083509 85 ntBASIC1.23□□□□□ -2.21
Shank1D3YZU1 Mir211-201ENSMUST00000083651 106 ntBASIC1.23□□□□□ -2.21
Shank1D3YZU1 Gm22576-201ENSMUST00000083733 104 ntBASIC1.23□□□□□ -2.21
Shank1D3YZU1 Gm23772-201ENSMUST00000104433 102 ntBASIC1.23□□□□□ -2.21
Shank1D3YZU1 Mir880-201ENSMUST00000104809 78 ntBASIC1.23□□□□□ -2.21
Shank1D3YZU1 Gm14671-201ENSMUST00000121790 262 ntBASIC1.23□□□□□ -2.21
Retrieved 100 of 76,532 protein–RNA pairs in 83.5 ms