Protein–RNA interactions for Protein: B1AVK5

Col4a6, Collagen, type IV, alpha 6, mousemouse

Predictions only

Length 1,691 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a6B1AVK5 Gm44464-201ENSMUST00000198010 138 ntBASIC-0.44□□□□□ -2.48
Col4a6B1AVK5 Gm44142-201ENSMUST00000203358 311 ntBASIC-0.44□□□□□ -2.48
Col4a6B1AVK5 Gm44807-201ENSMUST00000206115 154 ntBASIC-0.44□□□□□ -2.48
Col4a6B1AVK5 Gm45543-201ENSMUST00000209327 88 ntBASIC-0.44□□□□□ -2.48
Col4a6B1AVK5 Defb38-201ENSMUST00000066416 286 ntAPPRIS P1 TSL 1 (best) BASIC-0.44□□□□□ -2.48
Col4a6B1AVK5 Gm26054-201ENSMUST00000083037 107 ntBASIC-0.44□□□□□ -2.48
Col4a6B1AVK5 Snora16a-201ENSMUST00000083163 136 ntBASIC-0.44□□□□□ -2.48
Col4a6B1AVK5 Gm22652-201ENSMUST00000083207 131 ntBASIC-0.44□□□□□ -2.48
Col4a6B1AVK5 n-R5s183-201ENSMUST00000083939 115 ntBASIC-0.44□□□□□ -2.48
Col4a6B1AVK5 Polr2k-ps-201ENSMUST00000120170 175 ntBASIC-0.45□□□□□ -2.48
Col4a6B1AVK5 Gm23101-201ENSMUST00000157550 137 ntBASIC-0.45□□□□□ -2.48
Col4a6B1AVK5 Gm24634-201ENSMUST00000158672 107 ntBASIC-0.45□□□□□ -2.48
Col4a6B1AVK5 Gm25486-201ENSMUST00000158726 63 ntBASIC-0.45□□□□□ -2.48
Col4a6B1AVK5 Gm25935-201ENSMUST00000178746 107 ntBASIC-0.45□□□□□ -2.48
Col4a6B1AVK5 Bsph2-ps-201ENSMUST00000183795 241 ntBASIC-0.45□□□□□ -2.48
Col4a6B1AVK5 Gm38333-201ENSMUST00000193608 604 ntBASIC-0.45□□□□□ -2.48
Col4a6B1AVK5 AC098718.2-201ENSMUST00000226822 285 ntBASIC-0.45□□□□□ -2.48
Col4a6B1AVK5 AC158981.3-202ENSMUST00000228906 523 ntBASIC-0.45□□□□□ -2.48
Col4a6B1AVK5 Gm26081-201ENSMUST00000104068 132 ntBASIC-0.46□□□□□ -2.48
Col4a6B1AVK5 Gm12255-201ENSMUST00000117184 284 ntBASIC-0.46□□□□□ -2.48
Col4a6B1AVK5 Gm11322-201ENSMUST00000118095 435 ntBASIC-0.46□□□□□ -2.48
Col4a6B1AVK5 Gm24440-201ENSMUST00000157236 63 ntBASIC-0.46□□□□□ -2.48
Col4a6B1AVK5 Gm23411-201ENSMUST00000157988 62 ntBASIC-0.46□□□□□ -2.48
Col4a6B1AVK5 Gm24512-201ENSMUST00000174963 65 ntBASIC-0.46□□□□□ -2.48
Col4a6B1AVK5 Gm22851-201ENSMUST00000178741 94 ntBASIC-0.46□□□□□ -2.48
Col4a6B1AVK5 Gm25074-201ENSMUST00000178782 94 ntBASIC-0.46□□□□□ -2.48
Col4a6B1AVK5 Olfr1481-ps1-201ENSMUST00000207312 134 ntBASIC-0.46□□□□□ -2.48
Col4a6B1AVK5 AC159093.2-201ENSMUST00000227881 297 ntBASIC-0.46□□□□□ -2.48
Col4a6B1AVK5 Gm23404-201ENSMUST00000082543 97 ntBASIC-0.46□□□□□ -2.48
Col4a6B1AVK5 Gm25131-201ENSMUST00000082653 151 ntBASIC-0.46□□□□□ -2.48
Col4a6B1AVK5 Gm21897-201ENSMUST00000178312 1500 ntAPPRIS P1 BASIC-0.46□□□□□ -2.48
Col4a6B1AVK5 Mir669o-201ENSMUST00000103898 96 ntBASIC-0.46□□□□□ -2.48
Col4a6B1AVK5 Vmn1r-ps116-201ENSMUST00000121544 292 ntBASIC-0.46□□□□□ -2.48
Col4a6B1AVK5 Gm13725-201ENSMUST00000122139 207 ntBASIC-0.46□□□□□ -2.48
Col4a6B1AVK5 Gm25781-201ENSMUST00000122527 84 ntBASIC-0.46□□□□□ -2.48
Col4a6B1AVK5 Gm22016-201ENSMUST00000158793 114 ntBASIC-0.46□□□□□ -2.48
Col4a6B1AVK5 Gm10772-201ENSMUST00000167981 255 ntAPPRIS P1 BASIC-0.46□□□□□ -2.48
Col4a6B1AVK5 Gm23917-201ENSMUST00000175256 98 ntBASIC-0.46□□□□□ -2.48
Col4a6B1AVK5 Gm21830-201ENSMUST00000178898 135 ntAPPRIS P1 TSL 5 BASIC-0.46□□□□□ -2.48
Col4a6B1AVK5 Mir378c-201ENSMUST00000184478 99 ntBASIC-0.46□□□□□ -2.48
Col4a6B1AVK5 Gm44057-201ENSMUST00000204547 96 ntBASIC-0.46□□□□□ -2.48
Col4a6B1AVK5 AC150901.1-201ENSMUST00000208407 145 ntBASIC-0.46□□□□□ -2.48
Col4a6B1AVK5 Gm29344-201ENSMUST00000068143 210 ntBASIC-0.46□□□□□ -2.48
Col4a6B1AVK5 Gm24455-201ENSMUST00000083348 131 ntBASIC-0.46□□□□□ -2.48
Col4a6B1AVK5 Gm22030-201ENSMUST00000116942 63 ntBASIC-0.47□□□□□ -2.48
Col4a6B1AVK5 Gm13922-201ENSMUST00000119505 156 ntBASIC-0.47□□□□□ -2.48
Col4a6B1AVK5 Mir1899-201ENSMUST00000122798 96 ntBASIC-0.47□□□□□ -2.48
Col4a6B1AVK5 Gm22100-201ENSMUST00000157926 63 ntBASIC-0.47□□□□□ -2.48
Col4a6B1AVK5 Gm24577-201ENSMUST00000158580 63 ntBASIC-0.47□□□□□ -2.48
Col4a6B1AVK5 Gm9593-201ENSMUST00000166034 469 ntBASIC-0.47□□□□□ -2.48
Col4a6B1AVK5 Gm28766-201ENSMUST00000191086 234 ntBASIC-0.47□□□□□ -2.48
Col4a6B1AVK5 Gm37116-201ENSMUST00000195161 147 ntBASIC-0.47□□□□□ -2.48
Col4a6B1AVK5 Trgj2-201ENSMUST00000197113 60 ntAPPRIS P1 BASIC-0.47□□□□□ -2.48
Col4a6B1AVK5 AC154282.1-201ENSMUST00000223154 265 ntBASIC-0.47□□□□□ -2.48
Col4a6B1AVK5 Gm24524-201ENSMUST00000082925 170 ntBASIC-0.47□□□□□ -2.48
Col4a6B1AVK5 Gm24030-201ENSMUST00000083931 164 ntBASIC-0.47□□□□□ -2.48
Col4a6B1AVK5 Mir465b-1-201ENSMUST00000103940 79 ntBASIC-0.48□□□□□ -2.49
Col4a6B1AVK5 Mir465b-2-201ENSMUST00000104662 79 ntBASIC-0.48□□□□□ -2.49
Col4a6B1AVK5 Snord98-201ENSMUST00000116819 65 ntBASIC-0.48□□□□□ -2.49
Col4a6B1AVK5 Gm14287-201ENSMUST00000121060 117 ntBASIC-0.48□□□□□ -2.49
Col4a6B1AVK5 Gm14773-201ENSMUST00000125932 451 ntTSL 2 BASIC-0.48□□□□□ -2.49
Col4a6B1AVK5 Gm24509-201ENSMUST00000157086 101 ntBASIC-0.48□□□□□ -2.49
Col4a6B1AVK5 Gm27926-201ENSMUST00000157180 66 ntBASIC-0.48□□□□□ -2.49
Col4a6B1AVK5 Gm25358-201ENSMUST00000157189 101 ntBASIC-0.48□□□□□ -2.49
Col4a6B1AVK5 Gm23232-201ENSMUST00000157300 105 ntBASIC-0.48□□□□□ -2.49
Col4a6B1AVK5 Gm22429-201ENSMUST00000158553 130 ntBASIC-0.48□□□□□ -2.49
Col4a6B1AVK5 Mir3101-201ENSMUST00000175607 88 ntBASIC-0.48□□□□□ -2.49
Col4a6B1AVK5 Gm24487-201ENSMUST00000178017 63 ntBASIC-0.48□□□□□ -2.49
Col4a6B1AVK5 Snord116l12-201ENSMUST00000179816 94 ntBASIC-0.48□□□□□ -2.49
Col4a6B1AVK5 Gm24508-201ENSMUST00000180104 107 ntBASIC-0.48□□□□□ -2.49
Col4a6B1AVK5 Gm28926-201ENSMUST00000191063 680 ntBASIC-0.48□□□□□ -2.49
Col4a6B1AVK5 Gm44468-201ENSMUST00000199516 105 ntBASIC-0.48□□□□□ -2.49
Col4a6B1AVK5 1700014F14Rik-201ENSMUST00000199566 197 ntTSL 1 (best) BASIC-0.48□□□□□ -2.49
Col4a6B1AVK5 Gm45403-201ENSMUST00000209453 276 ntBASIC-0.48□□□□□ -2.49
Col4a6B1AVK5 AC159297.2-201ENSMUST00000219567 1075 ntBASIC-0.48□□□□□ -2.49
Col4a6B1AVK5 CT009718.4-201ENSMUST00000221881 109 ntBASIC-0.48□□□□□ -2.49
Col4a6B1AVK5 AC129085.1-201ENSMUST00000225263 165 ntBASIC-0.48□□□□□ -2.49
Col4a6B1AVK5 AC156574.2-201ENSMUST00000228023 282 ntBASIC-0.48□□□□□ -2.49
Col4a6B1AVK5 Gm25801-201ENSMUST00000082638 106 ntBASIC-0.48□□□□□ -2.49
Col4a6B1AVK5 Snord60-201ENSMUST00000082834 78 ntBASIC-0.48□□□□□ -2.49
Col4a6B1AVK5 Gm23239-201ENSMUST00000083006 181 ntBASIC-0.48□□□□□ -2.49
Col4a6B1AVK5 Gm21833-201ENSMUST00000177665 1500 ntAPPRIS P1 BASIC-0.48□□□□□ -2.49
Col4a6B1AVK5 Gm15069-201ENSMUST00000117792 192 ntBASIC-0.49□□□□□ -2.49
Col4a6B1AVK5 Gm15068-201ENSMUST00000119796 192 ntBASIC-0.49□□□□□ -2.49
Col4a6B1AVK5 Gm13518-201ENSMUST00000120018 233 ntBASIC-0.49□□□□□ -2.49
Col4a6B1AVK5 Gm22215-201ENSMUST00000157558 96 ntBASIC-0.49□□□□□ -2.49
Col4a6B1AVK5 Gm24290-201ENSMUST00000157634 96 ntBASIC-0.49□□□□□ -2.49
Col4a6B1AVK5 Gm22966-201ENSMUST00000157957 129 ntBASIC-0.49□□□□□ -2.49
Col4a6B1AVK5 Gm23065-201ENSMUST00000158236 130 ntBASIC-0.49□□□□□ -2.49
Col4a6B1AVK5 Gm25693-201ENSMUST00000175443 85 ntBASIC-0.49□□□□□ -2.49
Col4a6B1AVK5 Gm21903-201ENSMUST00000178039 90 ntAPPRIS P1 TSL 5 BASIC-0.49□□□□□ -2.49
Col4a6B1AVK5 Gm37750-201ENSMUST00000193563 129 ntBASIC-0.49□□□□□ -2.49
Col4a6B1AVK5 4930598N05Rik-207ENSMUST00000208997 83 ntTSL 5 BASIC-0.49□□□□□ -2.49
Col4a6B1AVK5 AC132615.1-201ENSMUST00000213873 255 ntBASIC-0.49□□□□□ -2.49
Col4a6B1AVK5 Gm6369-201ENSMUST00000069626 412 ntBASIC-0.49□□□□□ -2.49
Col4a6B1AVK5 Gm22005-201ENSMUST00000082795 141 ntBASIC-0.49□□□□□ -2.49
Col4a6B1AVK5 Gm25207-201ENSMUST00000093745 107 ntBASIC-0.49□□□□□ -2.49
Col4a6B1AVK5 Gm25431-201ENSMUST00000101978 107 ntBASIC-0.49□□□□□ -2.49
Col4a6B1AVK5 Gm24171-201ENSMUST00000104126 131 ntBASIC-0.49□□□□□ -2.49
Col4a6B1AVK5 Gm13065-201ENSMUST00000119178 141 ntBASIC-0.49□□□□□ -2.49
Retrieved 100 of 76,532 protein–RNA pairs in 138 ms