Protein–RNA interactions for Protein: B1AR17

Chd3, Chromodomain helicase DNA-binding protein 3, mousemouse

Predictions only

Length 2,055 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd3B1AR17 Gm45673-201ENSMUST00000210293 358 ntBASIC0.07□□□□□ -2.4
Chd3B1AR17 Gm23627-201ENSMUST00000082459 107 ntBASIC0.07□□□□□ -2.4
Chd3B1AR17 Gm22502-201ENSMUST00000082488 107 ntBASIC0.07□□□□□ -2.4
Chd3B1AR17 Gm22977-201ENSMUST00000082615 107 ntBASIC0.07□□□□□ -2.4
Chd3B1AR17 Gm24149-201ENSMUST00000082757 107 ntBASIC0.07□□□□□ -2.4
Chd3B1AR17 Gm23851-201ENSMUST00000083831 103 ntBASIC0.07□□□□□ -2.4
Chd3B1AR17 Mir500-201ENSMUST00000093600 92 ntBASIC0.07□□□□□ -2.4
Chd3B1AR17 Gm12785-201ENSMUST00000122052 172 ntBASIC0.07□□□□□ -2.4
Chd3B1AR17 Gm23536-201ENSMUST00000157541 134 ntBASIC0.07□□□□□ -2.4
Chd3B1AR17 Gm26180-201ENSMUST00000179942 107 ntBASIC0.07□□□□□ -2.4
Chd3B1AR17 Gm43367-201ENSMUST00000199986 625 ntBASIC0.07□□□□□ -2.4
Chd3B1AR17 Gm3702-201ENSMUST00000211754 346 ntBASIC0.07□□□□□ -2.4
Chd3B1AR17 Snord82-201ENSMUST00000082889 70 ntBASIC0.07□□□□□ -2.4
Chd3B1AR17 Gm11322-201ENSMUST00000118095 435 ntBASIC0.06□□□□□ -2.4
Chd3B1AR17 Gm13922-201ENSMUST00000119505 156 ntBASIC0.06□□□□□ -2.4
Chd3B1AR17 Gm23640-201ENSMUST00000157860 104 ntBASIC0.06□□□□□ -2.4
Chd3B1AR17 AC141438.3-201ENSMUST00000215632 202 ntBASIC0.06□□□□□ -2.4
Chd3B1AR17 AC116589.4-201ENSMUST00000222390 216 ntBASIC0.06□□□□□ -2.4
Chd3B1AR17 Gm25703-201ENSMUST00000083123 151 ntBASIC0.06□□□□□ -2.4
Chd3B1AR17 Snord42a-201ENSMUST00000082606 65 ntBASIC0.06□□□□□ -2.4
Chd3B1AR17 Gm24375-201ENSMUST00000104397 132 ntBASIC0.05□□□□□ -2.4
Chd3B1AR17 Gm26415-201ENSMUST00000157673 292 ntBASIC0.05□□□□□ -2.4
Chd3B1AR17 Gm25982-201ENSMUST00000157920 101 ntBASIC0.05□□□□□ -2.4
Chd3B1AR17 Gm23665-201ENSMUST00000158054 62 ntBASIC0.05□□□□□ -2.4
Chd3B1AR17 Gm23194-201ENSMUST00000158813 105 ntBASIC0.05□□□□□ -2.4
Chd3B1AR17 Gm23812-201ENSMUST00000175156 84 ntBASIC0.05□□□□□ -2.4
Chd3B1AR17 Gm23374-201ENSMUST00000175408 84 ntBASIC0.05□□□□□ -2.4
Chd3B1AR17 Gm45541-201ENSMUST00000210443 54 ntBASIC0.05□□□□□ -2.4
Chd3B1AR17 Gm19572-201ENSMUST00000214326 338 ntBASIC0.05□□□□□ -2.4
Chd3B1AR17 Gm25929-201ENSMUST00000082784 107 ntBASIC0.05□□□□□ -2.4
Chd3B1AR17 Mir496a-201ENSMUST00000093627 79 ntBASIC0.05□□□□□ -2.4
Chd3B1AR17 Snord91a-201ENSMUST00000104305 93 ntBASIC0.04□□□□□ -2.4
Chd3B1AR17 Gm23492-201ENSMUST00000116837 115 ntBASIC0.04□□□□□ -2.4
Chd3B1AR17 Gm12647-201ENSMUST00000118977 265 ntBASIC0.04□□□□□ -2.4
Chd3B1AR17 Gm14298-201ENSMUST00000139032 237 ntBASIC0.04□□□□□ -2.4
Chd3B1AR17 Gm16356-201ENSMUST00000143300 169 ntBASIC0.04□□□□□ -2.4
Chd3B1AR17 1700047A11Rik-202ENSMUST00000153552 622 ntTSL 1 (best) BASIC0.04□□□□□ -2.4
Chd3B1AR17 Gm22097-201ENSMUST00000157929 278 ntBASIC0.04□□□□□ -2.4
Chd3B1AR17 Gm22239-201ENSMUST00000175220 103 ntBASIC0.04□□□□□ -2.4
Chd3B1AR17 Gm28669-201ENSMUST00000188400 100 ntBASIC0.04□□□□□ -2.4
Chd3B1AR17 Olfr515-ps1-201ENSMUST00000208389 189 ntBASIC0.04□□□□□ -2.4
Chd3B1AR17 Gm23404-201ENSMUST00000082543 97 ntBASIC0.04□□□□□ -2.4
Chd3B1AR17 Gm22365-201ENSMUST00000093750 117 ntBASIC0.04□□□□□ -2.4
Chd3B1AR17 Gm14400-201ENSMUST00000117234 2135 ntBASIC0.04□□□□□ -2.4
Chd3B1AR17 Gm26073-201ENSMUST00000179906 127 ntBASIC0.04□□□□□ -2.4
Chd3B1AR17 Mir411-201ENSMUST00000083543 82 ntBASIC0.04□□□□□ -2.4
Chd3B1AR17 Gm25937-201ENSMUST00000083912 107 ntBASIC0.04□□□□□ -2.4
Chd3B1AR17 Gm23416-201ENSMUST00000175520 95 ntBASIC0.03□□□□□ -2.4
Chd3B1AR17 Mir6964-201ENSMUST00000200252 59 ntBASIC0.03□□□□□ -2.4
Chd3B1AR17 Gm44057-201ENSMUST00000204547 96 ntBASIC0.03□□□□□ -2.4
Chd3B1AR17 AC129085.1-201ENSMUST00000225263 165 ntBASIC0.03□□□□□ -2.4
Chd3B1AR17 Snora20-201ENSMUST00000082703 128 ntBASIC0.03□□□□□ -2.4
Chd3B1AR17 Gm14574-201ENSMUST00000120644 279 ntBASIC0.02□□□□□ -2.41
Chd3B1AR17 Gm12770-201ENSMUST00000121734 462 ntBASIC0.02□□□□□ -2.41
Chd3B1AR17 Gm22555-201ENSMUST00000157801 62 ntBASIC0.02□□□□□ -2.41
Chd3B1AR17 Gm25615-201ENSMUST00000177836 94 ntBASIC0.02□□□□□ -2.41
Chd3B1AR17 Gm44328-201ENSMUST00000199331 75 ntBASIC0.02□□□□□ -2.41
Chd3B1AR17 Gm44419-201ENSMUST00000203338 229 ntBASIC0.02□□□□□ -2.41
Chd3B1AR17 AC125311.1-201ENSMUST00000226950 220 ntBASIC0.02□□□□□ -2.41
Chd3B1AR17 Gm24171-201ENSMUST00000104126 131 ntBASIC0.02□□□□□ -2.41
Chd3B1AR17 Gm13565-201ENSMUST00000133596 700 ntTSL 1 (best) BASIC0.02□□□□□ -2.41
Chd3B1AR17 Mir3470a-201ENSMUST00000175223 77 ntBASIC0.02□□□□□ -2.41
Chd3B1AR17 Ptp4a1-206ENSMUST00000202889 135 ntTSL 2 BASIC0.02□□□□□ -2.41
Chd3B1AR17 Gm24042-201ENSMUST00000083114 103 ntBASIC0.02□□□□□ -2.41
Chd3B1AR17 Gm22087-201ENSMUST00000158339 88 ntBASIC0.01□□□□□ -2.41
Chd3B1AR17 Mir100-201ENSMUST00000175270 80 ntBASIC0.01□□□□□ -2.41
Chd3B1AR17 Gm24321-201ENSMUST00000175348 80 ntBASIC0.01□□□□□ -2.41
Chd3B1AR17 Vmn2r-ps20-201ENSMUST00000179853 382 ntBASIC0.01□□□□□ -2.41
Chd3B1AR17 Gm38183-201ENSMUST00000193189 205 ntBASIC0.01□□□□□ -2.41
Chd3B1AR17 Gm44063-201ENSMUST00000203307 376 ntBASIC0.01□□□□□ -2.41
Chd3B1AR17 Gm45027-201ENSMUST00000207081 78 ntTSL 3 BASIC0.01□□□□□ -2.41
Chd3B1AR17 Rny3-201ENSMUST00000083011 102 ntBASIC0.01□□□□□ -2.41
Chd3B1AR17 Gm23412-201ENSMUST00000083017 107 ntBASIC0.01□□□□□ -2.41
Chd3B1AR17 Gm22387-201ENSMUST00000158191 131 ntBASIC0.01□□□□□ -2.41
Chd3B1AR17 Gm22327-201ENSMUST00000158899 108 ntBASIC0.01□□□□□ -2.41
Chd3B1AR17 Gm16307-201ENSMUST00000161269 210 ntBASIC0.01□□□□□ -2.41
Chd3B1AR17 Gm25300-201ENSMUST00000175284 84 ntBASIC0.01□□□□□ -2.41
Chd3B1AR17 Gm23375-201ENSMUST00000175407 83 ntBASIC0.01□□□□□ -2.41
Chd3B1AR17 Gm29013-201ENSMUST00000187431 237 ntBASIC0.01□□□□□ -2.41
Chd3B1AR17 Gm44457-201ENSMUST00000198109 76 ntBASIC0.01□□□□□ -2.41
Chd3B1AR17 Gm45544-201ENSMUST00000211130 88 ntBASIC0.01□□□□□ -2.41
Chd3B1AR17 AC132437.1-201ENSMUST00000218308 320 ntBASIC0.01□□□□□ -2.41
Chd3B1AR17 Snord85-201ENSMUST00000083262 73 ntBASIC0.01□□□□□ -2.41
Chd3B1AR17 mt-Nd4-201ENSMUST00000082414 1378 ntAPPRIS P1 BASIC0.01□□□□□ -2.41
Chd3B1AR17 Mir709-201ENSMUST00000102190 88 ntBASIC0□□□□□ -2.41
Chd3B1AR17 Gm42606-201ENSMUST00000114209 239 ntBASIC0□□□□□ -2.41
Chd3B1AR17 Gm12797-201ENSMUST00000118645 273 ntBASIC0□□□□□ -2.41
Chd3B1AR17 Gm25388-201ENSMUST00000157339 151 ntBASIC0□□□□□ -2.41
Chd3B1AR17 Gm22883-201ENSMUST00000157376 106 ntBASIC0□□□□□ -2.41
Chd3B1AR17 Gm22466-201ENSMUST00000175278 69 ntBASIC0□□□□□ -2.41
Chd3B1AR17 Gm21903-201ENSMUST00000178039 90 ntAPPRIS P1 TSL 5 BASIC0□□□□□ -2.41
Chd3B1AR17 Gm29432-201ENSMUST00000185397 139 ntBASIC0□□□□□ -2.41
Chd3B1AR17 Gm43238-201ENSMUST00000196463 359 ntBASIC0□□□□□ -2.41
Chd3B1AR17 AC116319.1-201ENSMUST00000227765 222 ntBASIC0□□□□□ -2.41
Chd3B1AR17 Gm23625-201ENSMUST00000082457 100 ntBASIC0□□□□□ -2.41
Chd3B1AR17 Gm25814-201ENSMUST00000082754 107 ntBASIC0□□□□□ -2.41
Chd3B1AR17 Gm22576-201ENSMUST00000083733 104 ntBASIC0□□□□□ -2.41
Chd3B1AR17 Gm22607-201ENSMUST00000158291 105 ntBASIC-0.01□□□□□ -2.41
Chd3B1AR17 Gm22446-201ENSMUST00000180108 104 ntBASIC-0.01□□□□□ -2.41
Chd3B1AR17 Gm37586-201ENSMUST00000193654 204 ntBASIC-0.01□□□□□ -2.41
Retrieved 100 of 76,532 protein–RNA pairs in 86.1 ms