Protein–RNA interactions for Protein: A0N8N6

Trav12-2, T cell receptor alpha variable 12-2 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12-2A0N8N6 Gm13246-201ENSMUST00000120994 315 ntBASIC0.08□□□□□ -2.4
Trav12-2A0N8N6 n-R5s18-201ENSMUST00000122740 121 ntBASIC0.08□□□□□ -2.4
Trav12-2A0N8N6 Gm25952-201ENSMUST00000175329 74 ntBASIC0.08□□□□□ -2.4
Trav12-2A0N8N6 Vmn1r-ps13-201ENSMUST00000204697 134 ntBASIC0.08□□□□□ -2.4
Trav12-2A0N8N6 Mir200a-201ENSMUST00000083466 90 ntBASIC0.08□□□□□ -2.4
Trav12-2A0N8N6 Zfp616-205ENSMUST00000178159 2964 ntAPPRIS P1 BASIC0.08□□□□□ -2.4
Trav12-2A0N8N6 Gm22003-201ENSMUST00000101885 107 ntBASIC0.07□□□□□ -2.4
Trav12-2A0N8N6 Gm26255-201ENSMUST00000122492 103 ntBASIC0.07□□□□□ -2.4
Trav12-2A0N8N6 Gm22984-201ENSMUST00000122751 122 ntBASIC0.07□□□□□ -2.4
Trav12-2A0N8N6 Gm27723-201ENSMUST00000157398 63 ntBASIC0.07□□□□□ -2.4
Trav12-2A0N8N6 Gm22118-201ENSMUST00000175593 171 ntBASIC0.07□□□□□ -2.4
Trav12-2A0N8N6 Vmn1r-ps23-201ENSMUST00000175708 295 ntBASIC0.07□□□□□ -2.4
Trav12-2A0N8N6 Gm22756-201ENSMUST00000180118 107 ntBASIC0.07□□□□□ -2.4
Trav12-2A0N8N6 Bsph2-ps-201ENSMUST00000183795 241 ntBASIC0.07□□□□□ -2.4
Trav12-2A0N8N6 Gm29512-201ENSMUST00000185544 315 ntBASIC0.07□□□□□ -2.4
Trav12-2A0N8N6 Gm37997-201ENSMUST00000193515 267 ntBASIC0.07□□□□□ -2.4
Trav12-2A0N8N6 Gm44457-201ENSMUST00000198109 76 ntBASIC0.07□□□□□ -2.4
Trav12-2A0N8N6 Gm24316-201ENSMUST00000083041 107 ntBASIC0.07□□□□□ -2.4
Trav12-2A0N8N6 Gm23242-201ENSMUST00000083055 107 ntBASIC0.07□□□□□ -2.4
Trav12-2A0N8N6 Gm23095-201ENSMUST00000083446 107 ntBASIC0.07□□□□□ -2.4
Trav12-2A0N8N6 Mir410-201ENSMUST00000083563 81 ntBASIC0.07□□□□□ -2.4
Trav12-2A0N8N6 Gm22576-201ENSMUST00000083733 104 ntBASIC0.07□□□□□ -2.4
Trav12-2A0N8N6 Gm10509-201ENSMUST00000097384 259 ntAPPRIS P1 BASIC0.07□□□□□ -2.4
Trav12-2A0N8N6 Gm25494-201ENSMUST00000158143 100 ntBASIC0.06□□□□□ -2.4
Trav12-2A0N8N6 Gm22520-201ENSMUST00000158269 129 ntBASIC0.06□□□□□ -2.4
Trav12-2A0N8N6 Gm25241-201ENSMUST00000174909 84 ntBASIC0.06□□□□□ -2.4
Trav12-2A0N8N6 Gm26217-201ENSMUST00000175212 84 ntBASIC0.06□□□□□ -2.4
Trav12-2A0N8N6 Gm27668-201ENSMUST00000184188 120 ntBASIC0.06□□□□□ -2.4
Trav12-2A0N8N6 Gm22364-201ENSMUST00000083097 98 ntBASIC0.06□□□□□ -2.4
Trav12-2A0N8N6 Gm17172-201ENSMUST00000171782 190 ntTSL 3 BASIC0.05□□□□□ -2.4
Trav12-2A0N8N6 Mir6985-201ENSMUST00000184641 61 ntBASIC0.05□□□□□ -2.4
Trav12-2A0N8N6 Gm44464-201ENSMUST00000198010 138 ntBASIC0.05□□□□□ -2.4
Trav12-2A0N8N6 Eif4e-206ENSMUST00000200239 526 ntTSL 5 BASIC0.05□□□□□ -2.4
Trav12-2A0N8N6 Gm13922-201ENSMUST00000119505 156 ntBASIC0.04□□□□□ -2.4
Trav12-2A0N8N6 Gm24211-201ENSMUST00000158264 107 ntBASIC0.04□□□□□ -2.4
Trav12-2A0N8N6 Gm37313-201ENSMUST00000191673 290 ntBASIC0.04□□□□□ -2.4
Trav12-2A0N8N6 Snord95-201ENSMUST00000082846 68 ntBASIC0.04□□□□□ -2.4
Trav12-2A0N8N6 Gm26123-201ENSMUST00000083363 135 ntBASIC0.04□□□□□ -2.4
Trav12-2A0N8N6 CT030170.3-201ENSMUST00000221205 1815 ntBASIC0.03□□□□□ -2.4
Trav12-2A0N8N6 Gm24509-201ENSMUST00000157086 101 ntBASIC0.03□□□□□ -2.4
Trav12-2A0N8N6 Gm25358-201ENSMUST00000157189 101 ntBASIC0.03□□□□□ -2.4
Trav12-2A0N8N6 Gm24728-201ENSMUST00000158226 125 ntBASIC0.03□□□□□ -2.4
Trav12-2A0N8N6 Mir219b-201ENSMUST00000198317 65 ntBASIC0.03□□□□□ -2.4
Trav12-2A0N8N6 Olfr1401-ps1-201ENSMUST00000202296 211 ntBASIC0.03□□□□□ -2.4
Trav12-2A0N8N6 Gm25142-201ENSMUST00000082698 107 ntBASIC0.03□□□□□ -2.4
Trav12-2A0N8N6 Mir181a-1-201ENSMUST00000083631 87 ntBASIC0.03□□□□□ -2.4
Trav12-2A0N8N6 Zfp40-203ENSMUST00000140313 2754 ntTSL 1 (best) BASIC0.03□□□□□ -2.41
Trav12-2A0N8N6 Gm24379-201ENSMUST00000122695 86 ntBASIC0.02□□□□□ -2.41
Trav12-2A0N8N6 Gm26482-201ENSMUST00000158015 62 ntBASIC0.02□□□□□ -2.41
Trav12-2A0N8N6 Gm23761-201ENSMUST00000158347 104 ntBASIC0.02□□□□□ -2.41
Trav12-2A0N8N6 Gm23410-201ENSMUST00000179967 107 ntBASIC0.02□□□□□ -2.41
Trav12-2A0N8N6 Gm24415-201ENSMUST00000180218 107 ntBASIC0.02□□□□□ -2.41
Trav12-2A0N8N6 Gm29235-201ENSMUST00000185786 442 ntTSL 5 BASIC0.02□□□□□ -2.41
Trav12-2A0N8N6 Mir7229-201ENSMUST00000197062 53 ntBASIC0.02□□□□□ -2.41
Trav12-2A0N8N6 Trgj2-201ENSMUST00000197113 60 ntAPPRIS P1 BASIC0.02□□□□□ -2.41
Trav12-2A0N8N6 AC116319.1-201ENSMUST00000227765 222 ntBASIC0.02□□□□□ -2.41
Trav12-2A0N8N6 Gm22505-201ENSMUST00000082956 108 ntBASIC0.02□□□□□ -2.41
Trav12-2A0N8N6 Gm22363-201ENSMUST00000083100 108 ntBASIC0.02□□□□□ -2.41
Trav12-2A0N8N6 Gm23814-201ENSMUST00000083230 102 ntBASIC0.02□□□□□ -2.41
Trav12-2A0N8N6 Mir532-201ENSMUST00000093630 96 ntBASIC0.02□□□□□ -2.41
Trav12-2A0N8N6 Gm25875-201ENSMUST00000104323 107 ntBASIC0.01□□□□□ -2.41
Trav12-2A0N8N6 Gm24559-201ENSMUST00000157519 121 ntBASIC0.01□□□□□ -2.41
Trav12-2A0N8N6 Gm23821-201ENSMUST00000158738 106 ntBASIC0.01□□□□□ -2.41
Trav12-2A0N8N6 Scgb1b6-ps-201ENSMUST00000185337 199 ntBASIC0.01□□□□□ -2.41
Trav12-2A0N8N6 Gm28579-201ENSMUST00000186143 369 ntBASIC0.01□□□□□ -2.41
Trav12-2A0N8N6 Olfr1485-ps1-201ENSMUST00000208420 370 ntBASIC0.01□□□□□ -2.41
Trav12-2A0N8N6 Gm22753-201ENSMUST00000083657 107 ntBASIC0.01□□□□□ -2.41
Trav12-2A0N8N6 Gm21833-201ENSMUST00000177665 1500 ntAPPRIS P1 BASIC0.01□□□□□ -2.41
Trav12-2A0N8N6 Mir670-201ENSMUST00000102380 100 ntBASIC0□□□□□ -2.41
Trav12-2A0N8N6 Gm14919-201ENSMUST00000120839 390 ntBASIC0□□□□□ -2.41
Trav12-2A0N8N6 Gm22450-201ENSMUST00000179641 107 ntBASIC0□□□□□ -2.41
Trav12-2A0N8N6 Gm25473-201ENSMUST00000180191 107 ntBASIC0□□□□□ -2.41
Trav12-2A0N8N6 Mir8107-201ENSMUST00000184024 117 ntBASIC0□□□□□ -2.41
Trav12-2A0N8N6 Mir6390-201ENSMUST00000184405 129 ntBASIC0□□□□□ -2.41
Trav12-2A0N8N6 Gm45092-201ENSMUST00000205944 545 ntTSL 3 BASIC0□□□□□ -2.41
Trav12-2A0N8N6 Gm7240-201ENSMUST00000220769 664 ntBASIC0□□□□□ -2.41
Trav12-2A0N8N6 Gm24856-201ENSMUST00000082809 107 ntBASIC0□□□□□ -2.41
Trav12-2A0N8N6 Gm26071-201ENSMUST00000083261 107 ntBASIC0□□□□□ -2.41
Trav12-2A0N8N6 Gm24521-201ENSMUST00000083958 107 ntBASIC0□□□□□ -2.41
Trav12-2A0N8N6 Traj37-201ENSMUST00000103705 60 ntAPPRIS P1 BASIC-0.01□□□□□ -2.41
Trav12-2A0N8N6 Gm11904-201ENSMUST00000120562 248 ntBASIC-0.01□□□□□ -2.41
Trav12-2A0N8N6 Olfr1169-ps1-201ENSMUST00000121437 233 ntBASIC-0.01□□□□□ -2.41
Trav12-2A0N8N6 Gm24635-201ENSMUST00000122712 128 ntBASIC-0.01□□□□□ -2.41
Trav12-2A0N8N6 Gm45005-201ENSMUST00000206640 157 ntBASIC-0.01□□□□□ -2.41
Trav12-2A0N8N6 Gm25703-201ENSMUST00000083123 151 ntBASIC-0.01□□□□□ -2.41
Trav12-2A0N8N6 Gm25416-201ENSMUST00000104221 107 ntBASIC-0.02□□□□□ -2.41
Trav12-2A0N8N6 Gm22032-201ENSMUST00000116946 116 ntBASIC-0.02□□□□□ -2.41
Trav12-2A0N8N6 Gm25424-201ENSMUST00000157612 58 ntBASIC-0.02□□□□□ -2.41
Trav12-2A0N8N6 Gm22767-201ENSMUST00000158365 165 ntBASIC-0.02□□□□□ -2.41
Trav12-2A0N8N6 Mir100-201ENSMUST00000175270 80 ntBASIC-0.02□□□□□ -2.41
Trav12-2A0N8N6 Mir7077-201ENSMUST00000183991 57 ntBASIC-0.02□□□□□ -2.41
Trav12-2A0N8N6 Igkv13-54-1-201ENSMUST00000196495 303 ntBASIC-0.02□□□□□ -2.41
Trav12-2A0N8N6 Gm44455-201ENSMUST00000200061 82 ntBASIC-0.02□□□□□ -2.41
Trav12-2A0N8N6 AC166341.3-201ENSMUST00000221861 114 ntBASIC-0.02□□□□□ -2.41
Trav12-2A0N8N6 AL627387.1-201ENSMUST00000226063 250 ntBASIC-0.02□□□□□ -2.41
Trav12-2A0N8N6 Gm22368-201ENSMUST00000102416 109 ntBASIC-0.03□□□□□ -2.41
Trav12-2A0N8N6 Gm26076-201ENSMUST00000104065 105 ntBASIC-0.03□□□□□ -2.41
Trav12-2A0N8N6 Gm15213-201ENSMUST00000122098 216 ntBASIC-0.03□□□□□ -2.41
Trav12-2A0N8N6 Gm13569-201ENSMUST00000137221 574 ntTSL 3 BASIC-0.03□□□□□ -2.41
Trav12-2A0N8N6 Gm25444-201ENSMUST00000158999 113 ntBASIC-0.03□□□□□ -2.41
Retrieved 100 of 76,532 protein–RNA pairs in 162.7 ms