Protein–RNA interactions for Protein: A0A0B4J1J9

Trav11, T cell receptor alpha variable 11 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav11A0A0B4J1J9 Gm24500-201ENSMUST00000158447 124 ntBASIC0.07□□□□□ -2.4
Trav11A0A0B4J1J9 Gm29665-201ENSMUST00000191457 528 ntBASIC0.07□□□□□ -2.4
Trav11A0A0B4J1J9 Gm44458-201ENSMUST00000196594 143 ntBASIC0.07□□□□□ -2.4
Trav11A0A0B4J1J9 Gm44457-201ENSMUST00000198109 76 ntBASIC0.07□□□□□ -2.4
Trav11A0A0B4J1J9 Ptp4a1-206ENSMUST00000202889 135 ntTSL 2 BASIC0.07□□□□□ -2.4
Trav11A0A0B4J1J9 Vmn1r-ps13-201ENSMUST00000204697 134 ntBASIC0.07□□□□□ -2.4
Trav11A0A0B4J1J9 AC153526.1-201ENSMUST00000219750 190 ntBASIC0.07□□□□□ -2.4
Trav11A0A0B4J1J9 AC154282.1-201ENSMUST00000223154 265 ntBASIC0.07□□□□□ -2.4
Trav11A0A0B4J1J9 Mir200a-201ENSMUST00000083466 90 ntBASIC0.07□□□□□ -2.4
Trav11A0A0B4J1J9 Zfp40-203ENSMUST00000140313 2754 ntTSL 1 (best) BASIC0.07□□□□□ -2.4
Trav11A0A0B4J1J9 Gm26479-201ENSMUST00000122620 106 ntBASIC0.06□□□□□ -2.4
Trav11A0A0B4J1J9 Gm25241-201ENSMUST00000174909 84 ntBASIC0.06□□□□□ -2.4
Trav11A0A0B4J1J9 Gm26217-201ENSMUST00000175212 84 ntBASIC0.06□□□□□ -2.4
Trav11A0A0B4J1J9 Gm22118-201ENSMUST00000175593 171 ntBASIC0.06□□□□□ -2.4
Trav11A0A0B4J1J9 Zfp616-205ENSMUST00000178159 2964 ntAPPRIS P1 BASIC0.06□□□□□ -2.4
Trav11A0A0B4J1J9 Mir6394-201ENSMUST00000184738 99 ntBASIC0.06□□□□□ -2.4
Trav11A0A0B4J1J9 Nbdy-205ENSMUST00000208235 132 ntAPPRIS P2 TSL 2 BASIC0.06□□□□□ -2.4
Trav11A0A0B4J1J9 Gm24316-201ENSMUST00000083041 107 ntBASIC0.06□□□□□ -2.4
Trav11A0A0B4J1J9 Gm22576-201ENSMUST00000083733 104 ntBASIC0.06□□□□□ -2.4
Trav11A0A0B4J1J9 Gm25274-201ENSMUST00000104296 135 ntBASIC0.05□□□□□ -2.4
Trav11A0A0B4J1J9 Gm27723-201ENSMUST00000157398 63 ntBASIC0.05□□□□□ -2.4
Trav11A0A0B4J1J9 Gm25494-201ENSMUST00000158143 100 ntBASIC0.05□□□□□ -2.4
Trav11A0A0B4J1J9 Gm17172-201ENSMUST00000171782 190 ntTSL 3 BASIC0.05□□□□□ -2.4
Trav11A0A0B4J1J9 Vmn1r-ps23-201ENSMUST00000175708 295 ntBASIC0.05□□□□□ -2.4
Trav11A0A0B4J1J9 Gm29512-201ENSMUST00000185544 315 ntBASIC0.05□□□□□ -2.4
Trav11A0A0B4J1J9 Snord95-201ENSMUST00000082846 68 ntBASIC0.05□□□□□ -2.4
Trav11A0A0B4J1J9 Gm13922-201ENSMUST00000119505 156 ntBASIC0.04□□□□□ -2.4
Trav11A0A0B4J1J9 Gm26255-201ENSMUST00000122492 103 ntBASIC0.04□□□□□ -2.4
Trav11A0A0B4J1J9 Gm22984-201ENSMUST00000122751 122 ntBASIC0.04□□□□□ -2.4
Trav11A0A0B4J1J9 Gm16546-201ENSMUST00000159442 355 ntBASIC0.04□□□□□ -2.4
Trav11A0A0B4J1J9 Bsph2-ps-201ENSMUST00000183795 241 ntBASIC0.04□□□□□ -2.4
Trav11A0A0B4J1J9 Gm23242-201ENSMUST00000083055 107 ntBASIC0.04□□□□□ -2.4
Trav11A0A0B4J1J9 Mir224-201ENSMUST00000083608 82 ntBASIC0.04□□□□□ -2.4
Trav11A0A0B4J1J9 Gm10509-201ENSMUST00000097384 259 ntAPPRIS P1 BASIC0.04□□□□□ -2.4
Trav11A0A0B4J1J9 Gm23321-201ENSMUST00000104465 126 ntBASIC0.03□□□□□ -2.4
Trav11A0A0B4J1J9 Gm11008-201ENSMUST00000109032 622 ntTSL 5 BASIC0.03□□□□□ -2.4
Trav11A0A0B4J1J9 Gm22520-201ENSMUST00000158269 129 ntBASIC0.03□□□□□ -2.4
Trav11A0A0B4J1J9 Gm23761-201ENSMUST00000158347 104 ntBASIC0.03□□□□□ -2.4
Trav11A0A0B4J1J9 Mir6985-201ENSMUST00000184641 61 ntBASIC0.03□□□□□ -2.4
Trav11A0A0B4J1J9 Gm44464-201ENSMUST00000198010 138 ntBASIC0.03□□□□□ -2.4
Trav11A0A0B4J1J9 Eif4e-206ENSMUST00000200239 526 ntTSL 5 BASIC0.03□□□□□ -2.4
Trav11A0A0B4J1J9 Gm22364-201ENSMUST00000083097 98 ntBASIC0.03□□□□□ -2.4
Trav11A0A0B4J1J9 Gm29235-201ENSMUST00000185786 442 ntTSL 5 BASIC0.02□□□□□ -2.41
Trav11A0A0B4J1J9 Gm28579-201ENSMUST00000186143 369 ntBASIC0.02□□□□□ -2.41
Trav11A0A0B4J1J9 Gm37313-201ENSMUST00000191673 290 ntBASIC0.02□□□□□ -2.41
Trav11A0A0B4J1J9 Mir7229-201ENSMUST00000197062 53 ntBASIC0.02□□□□□ -2.41
Trav11A0A0B4J1J9 Gm26123-201ENSMUST00000083363 135 ntBASIC0.02□□□□□ -2.41
Trav11A0A0B4J1J9 Gm24509-201ENSMUST00000157086 101 ntBASIC0.01□□□□□ -2.41
Trav11A0A0B4J1J9 Gm25358-201ENSMUST00000157189 101 ntBASIC0.01□□□□□ -2.41
Trav11A0A0B4J1J9 Mir7077-201ENSMUST00000183991 57 ntBASIC0.01□□□□□ -2.41
Trav11A0A0B4J1J9 Mir6390-201ENSMUST00000184405 129 ntBASIC0.01□□□□□ -2.41
Trav11A0A0B4J1J9 AC116319.1-201ENSMUST00000227765 222 ntBASIC0.01□□□□□ -2.41
Trav11A0A0B4J1J9 Gm24559-201ENSMUST00000157519 121 ntBASIC0□□□□□ -2.41
Trav11A0A0B4J1J9 Gm24728-201ENSMUST00000158226 125 ntBASIC0□□□□□ -2.41
Trav11A0A0B4J1J9 Gm24211-201ENSMUST00000158264 107 ntBASIC0□□□□□ -2.41
Trav11A0A0B4J1J9 Gm25718-201ENSMUST00000158632 118 ntBASIC0□□□□□ -2.41
Trav11A0A0B4J1J9 Gm21833-201ENSMUST00000177665 1500 ntAPPRIS P1 BASIC0□□□□□ -2.41
Trav11A0A0B4J1J9 Olfr1401-ps1-201ENSMUST00000202296 211 ntBASIC0□□□□□ -2.41
Trav11A0A0B4J1J9 Olfr1485-ps1-201ENSMUST00000208420 370 ntBASIC0□□□□□ -2.41
Trav11A0A0B4J1J9 CT030170.3-201ENSMUST00000221205 1815 ntBASIC0□□□□□ -2.41
Trav11A0A0B4J1J9 Gm25142-201ENSMUST00000082698 107 ntBASIC0□□□□□ -2.41
Trav11A0A0B4J1J9 Gm25703-201ENSMUST00000083123 151 ntBASIC0□□□□□ -2.41
Trav11A0A0B4J1J9 Mir344-201ENSMUST00000083634 95 ntBASIC0□□□□□ -2.41
Trav11A0A0B4J1J9 Gm23126-201ENSMUST00000104260 134 ntBASIC-0.01□□□□□ -2.41
Trav11A0A0B4J1J9 Gm25875-201ENSMUST00000104323 107 ntBASIC-0.01□□□□□ -2.41
Trav11A0A0B4J1J9 Gm24415-201ENSMUST00000180218 107 ntBASIC-0.01□□□□□ -2.41
Trav11A0A0B4J1J9 Mir8107-201ENSMUST00000184024 117 ntBASIC-0.01□□□□□ -2.41
Trav11A0A0B4J1J9 Trgj2-201ENSMUST00000197113 60 ntAPPRIS P1 BASIC-0.01□□□□□ -2.41
Trav11A0A0B4J1J9 Gm26379-202ENSMUST00000200225 132 ntBASIC-0.01□□□□□ -2.41
Trav11A0A0B4J1J9 Gm45092-201ENSMUST00000205944 545 ntTSL 3 BASIC-0.01□□□□□ -2.41
Trav11A0A0B4J1J9 Gm7240-201ENSMUST00000220769 664 ntBASIC-0.01□□□□□ -2.41
Trav11A0A0B4J1J9 Gm22753-201ENSMUST00000083657 107 ntBASIC-0.01□□□□□ -2.41
Trav11A0A0B4J1J9 Gm11904-201ENSMUST00000120562 248 ntBASIC-0.02□□□□□ -2.41
Trav11A0A0B4J1J9 Gm14919-201ENSMUST00000120839 390 ntBASIC-0.02□□□□□ -2.41
Trav11A0A0B4J1J9 Gm24635-201ENSMUST00000122712 128 ntBASIC-0.02□□□□□ -2.41
Trav11A0A0B4J1J9 Gm23821-201ENSMUST00000158738 106 ntBASIC-0.02□□□□□ -2.41
Trav11A0A0B4J1J9 Gm22450-201ENSMUST00000179641 107 ntBASIC-0.02□□□□□ -2.41
Trav11A0A0B4J1J9 Gm25473-201ENSMUST00000180191 107 ntBASIC-0.02□□□□□ -2.41
Trav11A0A0B4J1J9 Scgb1b6-ps-201ENSMUST00000185337 199 ntBASIC-0.02□□□□□ -2.41
Trav11A0A0B4J1J9 Gm38208-201ENSMUST00000192476 114 ntBASIC-0.02□□□□□ -2.41
Trav11A0A0B4J1J9 Gm24856-201ENSMUST00000082809 107 ntBASIC-0.02□□□□□ -2.41
Trav11A0A0B4J1J9 Snord82-201ENSMUST00000082889 70 ntBASIC-0.02□□□□□ -2.41
Trav11A0A0B4J1J9 Gm26071-201ENSMUST00000083261 107 ntBASIC-0.02□□□□□ -2.41
Trav11A0A0B4J1J9 Gm24521-201ENSMUST00000083958 107 ntBASIC-0.02□□□□□ -2.41
Trav11A0A0B4J1J9 Gm22368-201ENSMUST00000102416 109 ntBASIC-0.03□□□□□ -2.41
Trav11A0A0B4J1J9 Gm22999-201ENSMUST00000157082 88 ntBASIC-0.03□□□□□ -2.41
Trav11A0A0B4J1J9 Gm25424-201ENSMUST00000157612 58 ntBASIC-0.03□□□□□ -2.41
Trav11A0A0B4J1J9 Gm26482-201ENSMUST00000158015 62 ntBASIC-0.03□□□□□ -2.41
Trav11A0A0B4J1J9 Gm22767-201ENSMUST00000158365 165 ntBASIC-0.03□□□□□ -2.41
Trav11A0A0B4J1J9 Gm25444-201ENSMUST00000158999 113 ntBASIC-0.03□□□□□ -2.41
Trav11A0A0B4J1J9 Mir100-201ENSMUST00000175270 80 ntBASIC-0.03□□□□□ -2.41
Trav11A0A0B4J1J9 Gm24575-201ENSMUST00000175502 77 ntBASIC-0.03□□□□□ -2.41
Trav11A0A0B4J1J9 Mir5624-201ENSMUST00000176635 61 ntBASIC-0.03□□□□□ -2.41
Trav11A0A0B4J1J9 Gm28001-201ENSMUST00000183561 117 ntBASIC-0.03□□□□□ -2.41
Trav11A0A0B4J1J9 Gm27402-201ENSMUST00000183890 120 ntBASIC-0.03□□□□□ -2.41
Trav11A0A0B4J1J9 Gm44455-201ENSMUST00000200061 82 ntBASIC-0.03□□□□□ -2.41
Trav11A0A0B4J1J9 Gm45005-201ENSMUST00000206640 157 ntBASIC-0.03□□□□□ -2.41
Trav11A0A0B4J1J9 Mir181a-1-201ENSMUST00000083631 87 ntBASIC-0.03□□□□□ -2.41
Trav11A0A0B4J1J9 Traj37-201ENSMUST00000103705 60 ntAPPRIS P1 BASIC-0.04□□□□□ -2.42
Trav11A0A0B4J1J9 Olfr1169-ps1-201ENSMUST00000121437 233 ntBASIC-0.04□□□□□ -2.42
Retrieved 100 of 76,532 protein–RNA pairs in 82.9 ms