Protein–RNA interactions for Protein: A0A0B4J1H3

Trbv16, T cell receptor beta, variable 16 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv16A0A0B4J1H3 Gm25538-201ENSMUST00000101943 107 ntBASIC-0.78□□□□□ -2.53
Trbv16A0A0B4J1H3 Gm24171-201ENSMUST00000104126 131 ntBASIC-0.78□□□□□ -2.53
Trbv16A0A0B4J1H3 n-R5s171-201ENSMUST00000104128 79 ntBASIC-0.78□□□□□ -2.53
Trbv16A0A0B4J1H3 Gm13065-201ENSMUST00000119178 141 ntBASIC-0.78□□□□□ -2.53
Trbv16A0A0B4J1H3 Gm24288-201ENSMUST00000157630 144 ntBASIC-0.78□□□□□ -2.53
Trbv16A0A0B4J1H3 Gm26158-201ENSMUST00000158973 119 ntBASIC-0.78□□□□□ -2.53
Trbv16A0A0B4J1H3 Mir327-201ENSMUST00000199328 69 ntBASIC-0.78□□□□□ -2.53
Trbv16A0A0B4J1H3 AC159619.2-201ENSMUST00000222924 401 ntBASIC-0.78□□□□□ -2.53
Trbv16A0A0B4J1H3 Gm26335-201ENSMUST00000178449 107 ntBASIC-0.79□□□□□ -2.54
Trbv16A0A0B4J1H3 Gm23002-201ENSMUST00000179221 107 ntBASIC-0.79□□□□□ -2.54
Trbv16A0A0B4J1H3 Snora16a-202ENSMUST00000196061 137 ntBASIC-0.79□□□□□ -2.54
Trbv16A0A0B4J1H3 Gm44487-201ENSMUST00000205145 325 ntBASIC-0.79□□□□□ -2.54
Trbv16A0A0B4J1H3 AC158981.3-202ENSMUST00000228906 523 ntBASIC-0.79□□□□□ -2.54
Trbv16A0A0B4J1H3 Gm24233-201ENSMUST00000104317 122 ntBASIC-0.8□□□□□ -2.54
Trbv16A0A0B4J1H3 Gm22541-201ENSMUST00000158165 127 ntBASIC-0.8□□□□□ -2.54
Trbv16A0A0B4J1H3 Bsph2-ps-201ENSMUST00000183795 241 ntBASIC-0.8□□□□□ -2.54
Trbv16A0A0B4J1H3 Mir7038-201ENSMUST00000184833 71 ntBASIC-0.8□□□□□ -2.54
Trbv16A0A0B4J1H3 Ighv12-2-201ENSMUST00000191949 362 ntBASIC-0.8□□□□□ -2.54
Trbv16A0A0B4J1H3 Gm44726-201ENSMUST00000203427 217 ntBASIC-0.8□□□□□ -2.54
Trbv16A0A0B4J1H3 Olfr1435-ps1-201ENSMUST00000207773 249 ntBASIC-0.8□□□□□ -2.54
Trbv16A0A0B4J1H3 1700124M09Rik-201ENSMUST00000217047 305 ntTSL 1 (best) BASIC-0.8□□□□□ -2.54
Trbv16A0A0B4J1H3 Gm22421-201ENSMUST00000083058 107 ntBASIC-0.8□□□□□ -2.54
Trbv16A0A0B4J1H3 Mir1a-1-201ENSMUST00000093635 77 ntBASIC-0.8□□□□□ -2.54
Trbv16A0A0B4J1H3 n-R5s39-201ENSMUST00000122613 108 ntBASIC-0.81□□□□□ -2.54
Trbv16A0A0B4J1H3 Gm37116-201ENSMUST00000195161 147 ntBASIC-0.81□□□□□ -2.54
Trbv16A0A0B4J1H3 Trgj2-201ENSMUST00000197113 60 ntAPPRIS P1 BASIC-0.81□□□□□ -2.54
Trbv16A0A0B4J1H3 AC154282.1-201ENSMUST00000223154 265 ntBASIC-0.81□□□□□ -2.54
Trbv16A0A0B4J1H3 AC159093.2-201ENSMUST00000227881 297 ntBASIC-0.81□□□□□ -2.54
Trbv16A0A0B4J1H3 AC160984.1-201ENSMUST00000225855 3154 ntBASIC-0.82□□□□□ -2.54
Trbv16A0A0B4J1H3 Gm23016-201ENSMUST00000158431 62 ntBASIC-0.82□□□□□ -2.54
Trbv16A0A0B4J1H3 Gm10548-202ENSMUST00000165672 272 ntBASIC-0.82□□□□□ -2.54
Trbv16A0A0B4J1H3 Gm27607-201ENSMUST00000185162 122 ntBASIC-0.82□□□□□ -2.54
Trbv16A0A0B4J1H3 Gm28217-201ENSMUST00000188613 648 ntTSL 5 BASIC-0.82□□□□□ -2.54
Trbv16A0A0B4J1H3 Gm28330-201ENSMUST00000190353 171 ntBASIC-0.82□□□□□ -2.54
Trbv16A0A0B4J1H3 Gm43563-201ENSMUST00000196761 198 ntBASIC-0.82□□□□□ -2.54
Trbv16A0A0B4J1H3 AC167192.2-201ENSMUST00000224794 198 ntBASIC-0.82□□□□□ -2.54
Trbv16A0A0B4J1H3 Gm23448-201ENSMUST00000083151 104 ntBASIC-0.82□□□□□ -2.54
Trbv16A0A0B4J1H3 Mir463-201ENSMUST00000093570 75 ntBASIC-0.82□□□□□ -2.54
Trbv16A0A0B4J1H3 Gm27047-201ENSMUST00000183072 1819 ntBASIC-0.82□□□□□ -2.54
Trbv16A0A0B4J1H3 Gm22321-201ENSMUST00000157152 104 ntBASIC-0.83□□□□□ -2.54
Trbv16A0A0B4J1H3 Gm22100-201ENSMUST00000157926 63 ntBASIC-0.83□□□□□ -2.54
Trbv16A0A0B4J1H3 Gm22838-201ENSMUST00000158437 99 ntBASIC-0.83□□□□□ -2.54
Trbv16A0A0B4J1H3 Gm23148-201ENSMUST00000180367 107 ntBASIC-0.83□□□□□ -2.54
Trbv16A0A0B4J1H3 Gm44327-201ENSMUST00000200068 117 ntBASIC-0.83□□□□□ -2.54
Trbv16A0A0B4J1H3 Gm25258-201ENSMUST00000083049 107 ntBASIC-0.83□□□□□ -2.54
Trbv16A0A0B4J1H3 Gm25611-201ENSMUST00000104017 133 ntBASIC-0.84□□□□□ -2.54
Trbv16A0A0B4J1H3 Gm28579-201ENSMUST00000186143 369 ntBASIC-0.84□□□□□ -2.54
Trbv16A0A0B4J1H3 Gm28917-201ENSMUST00000187294 237 ntBASIC-0.84□□□□□ -2.54
Trbv16A0A0B4J1H3 Gm28766-201ENSMUST00000191086 234 ntBASIC-0.84□□□□□ -2.54
Trbv16A0A0B4J1H3 Mir376b-201ENSMUST00000195930 82 ntBASIC-0.84□□□□□ -2.54
Trbv16A0A0B4J1H3 Gm42845-201ENSMUST00000197766 105 ntBASIC-0.84□□□□□ -2.54
Trbv16A0A0B4J1H3 Snord60-201ENSMUST00000082834 78 ntBASIC-0.84□□□□□ -2.54
Trbv16A0A0B4J1H3 Polr2k-ps-201ENSMUST00000120170 175 ntBASIC-0.85□□□□□ -2.55
Trbv16A0A0B4J1H3 Gm44469-201ENSMUST00000198558 79 ntBASIC-0.85□□□□□ -2.55
Trbv16A0A0B4J1H3 AC116460.1-201ENSMUST00000219040 313 ntBASIC-0.85□□□□□ -2.55
Trbv16A0A0B4J1H3 Gm23142-201ENSMUST00000101848 105 ntBASIC-0.86□□□□□ -2.55
Trbv16A0A0B4J1H3 Gm26240-201ENSMUST00000101893 105 ntBASIC-0.86□□□□□ -2.55
Trbv16A0A0B4J1H3 Mir1899-201ENSMUST00000122798 96 ntBASIC-0.86□□□□□ -2.55
Trbv16A0A0B4J1H3 Gm11749-201ENSMUST00000127327 184 ntTSL 2 BASIC-0.86□□□□□ -2.55
Trbv16A0A0B4J1H3 Gm25909-201ENSMUST00000157619 121 ntBASIC-0.86□□□□□ -2.55
Trbv16A0A0B4J1H3 Gm24467-201ENSMUST00000157887 126 ntBASIC-0.86□□□□□ -2.55
Trbv16A0A0B4J1H3 Gm23921-201ENSMUST00000175258 107 ntBASIC-0.86□□□□□ -2.55
Trbv16A0A0B4J1H3 Rpl23a-ps9-201ENSMUST00000188369 463 ntBASIC-0.86□□□□□ -2.55
Trbv16A0A0B4J1H3 Rpl23a-ps11-201ENSMUST00000191583 463 ntBASIC-0.86□□□□□ -2.55
Trbv16A0A0B4J1H3 Smr2-203ENSMUST00000196477 676 ntAPPRIS ALT2 TSL 1 (best) BASIC-0.86□□□□□ -2.55
Trbv16A0A0B4J1H3 Smr2-204ENSMUST00000199635 680 ntAPPRIS ALT2 TSL 1 (best) BASIC-0.86□□□□□ -2.55
Trbv16A0A0B4J1H3 Gm23625-201ENSMUST00000082457 100 ntBASIC-0.86□□□□□ -2.55
Trbv16A0A0B4J1H3 Gm23881-201ENSMUST00000116872 66 ntBASIC-0.87□□□□□ -2.55
Trbv16A0A0B4J1H3 Gm12584-201ENSMUST00000117109 1105 ntBASIC-0.87□□□□□ -2.55
Trbv16A0A0B4J1H3 Gm15069-201ENSMUST00000117792 192 ntBASIC-0.87□□□□□ -2.55
Trbv16A0A0B4J1H3 Gm15068-201ENSMUST00000119796 192 ntBASIC-0.87□□□□□ -2.55
Trbv16A0A0B4J1H3 Gm22815-201ENSMUST00000157451 62 ntBASIC-0.87□□□□□ -2.55
Trbv16A0A0B4J1H3 Gm23857-201ENSMUST00000158379 111 ntBASIC-0.87□□□□□ -2.55
Trbv16A0A0B4J1H3 Gm17542-201ENSMUST00000169859 99 ntAPPRIS P1 TSL 5 BASIC-0.87□□□□□ -2.55
Trbv16A0A0B4J1H3 Gm27410-201ENSMUST00000183851 115 ntBASIC-0.87□□□□□ -2.55
Trbv16A0A0B4J1H3 Gm45402-201ENSMUST00000211796 223 ntBASIC-0.87□□□□□ -2.55
Trbv16A0A0B4J1H3 AC132615.1-201ENSMUST00000213873 255 ntBASIC-0.87□□□□□ -2.55
Trbv16A0A0B4J1H3 Gm24030-201ENSMUST00000083931 164 ntBASIC-0.87□□□□□ -2.55
Trbv16A0A0B4J1H3 Gm26081-201ENSMUST00000104068 132 ntBASIC-0.88□□□□□ -2.55
Trbv16A0A0B4J1H3 Gm23482-201ENSMUST00000104172 122 ntBASIC-0.88□□□□□ -2.55
Trbv16A0A0B4J1H3 Gm12785-201ENSMUST00000122052 172 ntBASIC-0.88□□□□□ -2.55
Trbv16A0A0B4J1H3 Gm22999-201ENSMUST00000157082 88 ntBASIC-0.88□□□□□ -2.55
Trbv16A0A0B4J1H3 Gm10715-202ENSMUST00000177969 681 ntAPPRIS P5 TSL 5 BASIC-0.88□□□□□ -2.55
Trbv16A0A0B4J1H3 Gm25671-201ENSMUST00000178612 105 ntBASIC-0.88□□□□□ -2.55
Trbv16A0A0B4J1H3 Gm25314-201ENSMUST00000178810 79 ntBASIC-0.88□□□□□ -2.55
Trbv16A0A0B4J1H3 Gm23307-201ENSMUST00000179167 105 ntBASIC-0.88□□□□□ -2.55
Trbv16A0A0B4J1H3 Gm25286-201ENSMUST00000179790 105 ntBASIC-0.88□□□□□ -2.55
Trbv16A0A0B4J1H3 Mir8116-201ENSMUST00000184134 97 ntBASIC-0.88□□□□□ -2.55
Trbv16A0A0B4J1H3 Gm44468-201ENSMUST00000199516 105 ntBASIC-0.88□□□□□ -2.55
Trbv16A0A0B4J1H3 AL929265.1-201ENSMUST00000213427 125 ntBASIC-0.88□□□□□ -2.55
Trbv16A0A0B4J1H3 Gm19790-201ENSMUST00000214414 251 ntBASIC-0.88□□□□□ -2.55
Trbv16A0A0B4J1H3 Gm25078-201ENSMUST00000082530 107 ntBASIC-0.88□□□□□ -2.55
Trbv16A0A0B4J1H3 Gm22509-201ENSMUST00000082775 107 ntBASIC-0.88□□□□□ -2.55
Trbv16A0A0B4J1H3 Mir183-201ENSMUST00000083685 70 ntBASIC-0.88□□□□□ -2.55
Trbv16A0A0B4J1H3 Gm22030-201ENSMUST00000116942 63 ntBASIC-0.89□□□□□ -2.55
Trbv16A0A0B4J1H3 Gm15002-201ENSMUST00000118406 452 ntBASIC-0.89□□□□□ -2.55
Trbv16A0A0B4J1H3 Gm13922-201ENSMUST00000119505 156 ntBASIC-0.89□□□□□ -2.55
Trbv16A0A0B4J1H3 Gm13725-201ENSMUST00000122139 207 ntBASIC-0.89□□□□□ -2.55
Trbv16A0A0B4J1H3 Gm25109-201ENSMUST00000122474 114 ntBASIC-0.89□□□□□ -2.55
Trbv16A0A0B4J1H3 Gm23536-201ENSMUST00000157541 134 ntBASIC-0.89□□□□□ -2.55
Retrieved 100 of 76,532 protein–RNA pairs in 77.1 ms