Protein–RNA interactions for Protein: A0A075B654

Trav3-4, T cell receptor alpha variable 3-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-4A0A075B654 Gm24793-201ENSMUST00000104289 132 ntBASIC-1.03□□□□□ -2.57
Trav3-4A0A075B654 Gm22048-201ENSMUST00000104721 89 ntBASIC-1.03□□□□□ -2.57
Trav3-4A0A075B654 Gm25102-201ENSMUST00000122479 112 ntBASIC-1.03□□□□□ -2.57
Trav3-4A0A075B654 Gm37116-201ENSMUST00000195161 147 ntBASIC-1.03□□□□□ -2.57
Trav3-4A0A075B654 AC159093.2-201ENSMUST00000227881 297 ntBASIC-1.03□□□□□ -2.57
Trav3-4A0A075B654 Gm10721-201ENSMUST00000143083 669 ntAPPRIS P1 TSL 5 BASIC-1.04□□□□□ -2.58
Trav3-4A0A075B654 Gm23101-201ENSMUST00000157550 137 ntBASIC-1.04□□□□□ -2.58
Trav3-4A0A075B654 Gm22966-201ENSMUST00000157957 129 ntBASIC-1.04□□□□□ -2.58
Trav3-4A0A075B654 Gm23759-201ENSMUST00000158351 268 ntBASIC-1.04□□□□□ -2.58
Trav3-4A0A075B654 Gm26290-201ENSMUST00000158891 145 ntBASIC-1.04□□□□□ -2.58
Trav3-4A0A075B654 Gm24508-201ENSMUST00000180104 107 ntBASIC-1.04□□□□□ -2.58
Trav3-4A0A075B654 Gm37750-201ENSMUST00000193563 129 ntBASIC-1.04□□□□□ -2.58
Trav3-4A0A075B654 AC098718.2-201ENSMUST00000226822 285 ntBASIC-1.04□□□□□ -2.58
Trav3-4A0A075B654 Gm10718-201ENSMUST00000099046 681 ntAPPRIS P1 TSL 5 BASIC-1.04□□□□□ -2.58
Trav3-4A0A075B654 Gm27047-201ENSMUST00000183072 1819 ntBASIC-1.04□□□□□ -2.58
Trav3-4A0A075B654 Vmn1r-ps116-201ENSMUST00000121544 292 ntBASIC-1.05□□□□□ -2.58
Trav3-4A0A075B654 Gm15899-201ENSMUST00000128586 238 ntBASIC-1.05□□□□□ -2.58
Trav3-4A0A075B654 Gm13596-201ENSMUST00000153354 292 ntTSL 5 BASIC-1.05□□□□□ -2.58
Trav3-4A0A075B654 Gm22541-201ENSMUST00000158165 127 ntBASIC-1.05□□□□□ -2.58
Trav3-4A0A075B654 Gm27659-201ENSMUST00000183472 98 ntBASIC-1.05□□□□□ -2.58
Trav3-4A0A075B654 Mir7651-201ENSMUST00000184154 64 ntBASIC-1.05□□□□□ -2.58
Trav3-4A0A075B654 Gm44338-201ENSMUST00000198614 110 ntBASIC-1.05□□□□□ -2.58
Trav3-4A0A075B654 Gm22578-201ENSMUST00000083730 107 ntBASIC-1.05□□□□□ -2.58
Trav3-4A0A075B654 Gm21833-201ENSMUST00000177665 1500 ntAPPRIS P1 BASIC-1.05□□□□□ -2.58
Trav3-4A0A075B654 Gm23492-201ENSMUST00000116837 115 ntBASIC-1.06□□□□□ -2.58
Trav3-4A0A075B654 Gm10548-202ENSMUST00000165672 272 ntBASIC-1.06□□□□□ -2.58
Trav3-4A0A075B654 Gm20462-201ENSMUST00000172623 408 ntBASIC-1.06□□□□□ -2.58
Trav3-4A0A075B654 Gm44135-201ENSMUST00000205221 368 ntBASIC-1.06□□□□□ -2.58
Trav3-4A0A075B654 Gm39149-201ENSMUST00000210258 186 ntTSL 5 BASIC-1.06□□□□□ -2.58
Trav3-4A0A075B654 AC147101.1-201ENSMUST00000217964 312 ntBASIC-1.06□□□□□ -2.58
Trav3-4A0A075B654 Mir96-201ENSMUST00000083652 106 ntBASIC-1.06□□□□□ -2.58
Trav3-4A0A075B654 n-R5s8-201ENSMUST00000104121 118 ntBASIC-1.07□□□□□ -2.58
Trav3-4A0A075B654 Scgb1b23-ps-201ENSMUST00000116009 252 ntBASIC-1.07□□□□□ -2.58
Trav3-4A0A075B654 Gm23025-201ENSMUST00000158769 111 ntBASIC-1.07□□□□□ -2.58
Trav3-4A0A075B654 Gm21903-201ENSMUST00000178039 90 ntAPPRIS P1 TSL 5 BASIC-1.07□□□□□ -2.58
Trav3-4A0A075B654 Gm38109-201ENSMUST00000195386 181 ntBASIC-1.07□□□□□ -2.58
Trav3-4A0A075B654 Gm44469-201ENSMUST00000198558 79 ntBASIC-1.07□□□□□ -2.58
Trav3-4A0A075B654 Gm44615-201ENSMUST00000206548 358 ntBASIC-1.07□□□□□ -2.58
Trav3-4A0A075B654 Mir363-201ENSMUST00000093598 75 ntBASIC-1.07□□□□□ -2.58
Trav3-4A0A075B654 Gm14007-201ENSMUST00000118288 210 ntBASIC-1.08□□□□□ -2.58
Trav3-4A0A075B654 Gm25781-201ENSMUST00000122527 84 ntBASIC-1.08□□□□□ -2.58
Trav3-4A0A075B654 Gm22883-201ENSMUST00000157376 106 ntBASIC-1.08□□□□□ -2.58
Trav3-4A0A075B654 Gm22450-201ENSMUST00000179641 107 ntBASIC-1.08□□□□□ -2.58
Trav3-4A0A075B654 Gm28766-201ENSMUST00000191086 234 ntBASIC-1.08□□□□□ -2.58
Trav3-4A0A075B654 Cr2-206ENSMUST00000193801 206 ntTSL 1 (best) BASIC-1.08□□□□□ -2.58
Trav3-4A0A075B654 Mir376b-201ENSMUST00000195930 82 ntBASIC-1.08□□□□□ -2.58
Trav3-4A0A075B654 Gm43563-201ENSMUST00000196761 198 ntBASIC-1.08□□□□□ -2.58
Trav3-4A0A075B654 Trgj2-201ENSMUST00000197113 60 ntAPPRIS P1 BASIC-1.08□□□□□ -2.58
Trav3-4A0A075B654 Defb38-201ENSMUST00000066416 286 ntAPPRIS P1 TSL 1 (best) BASIC-1.08□□□□□ -2.58
Trav3-4A0A075B654 Gm23614-201ENSMUST00000082598 107 ntBASIC-1.08□□□□□ -2.58
Trav3-4A0A075B654 Gm22030-201ENSMUST00000116942 63 ntBASIC-1.09□□□□□ -2.58
Trav3-4A0A075B654 Gm22100-201ENSMUST00000157926 63 ntBASIC-1.09□□□□□ -2.58
Trav3-4A0A075B654 Gm28506-201ENSMUST00000189937 150 ntBASIC-1.09□□□□□ -2.58
Trav3-4A0A075B654 Mir1899-201ENSMUST00000122798 96 ntBASIC-1.1□□□□□ -2.59
Trav3-4A0A075B654 Gm22340-201ENSMUST00000157717 114 ntBASIC-1.1□□□□□ -2.59
Trav3-4A0A075B654 Gm23857-201ENSMUST00000158379 111 ntBASIC-1.1□□□□□ -2.59
Trav3-4A0A075B654 Gm25160-201ENSMUST00000158914 102 ntBASIC-1.1□□□□□ -2.59
Trav3-4A0A075B654 Mir5124a-201ENSMUST00000175528 72 ntBASIC-1.1□□□□□ -2.59
Trav3-4A0A075B654 Gm38268-201ENSMUST00000195813 193 ntBASIC-1.1□□□□□ -2.59
Trav3-4A0A075B654 Gm44392-201ENSMUST00000196758 115 ntBASIC-1.1□□□□□ -2.59
Trav3-4A0A075B654 Gm22509-201ENSMUST00000082775 107 ntBASIC-1.1□□□□□ -2.59
Trav3-4A0A075B654 Snord60-201ENSMUST00000082834 78 ntBASIC-1.1□□□□□ -2.59
Trav3-4A0A075B654 Gm24030-201ENSMUST00000083931 164 ntBASIC-1.1□□□□□ -2.59
Trav3-4A0A075B654 Gm24171-201ENSMUST00000104126 131 ntBASIC-1.11□□□□□ -2.59
Trav3-4A0A075B654 Gm23881-201ENSMUST00000116872 66 ntBASIC-1.11□□□□□ -2.59
Trav3-4A0A075B654 Gm24894-201ENSMUST00000122744 118 ntBASIC-1.11□□□□□ -2.59
Trav3-4A0A075B654 Mir5124b-201ENSMUST00000184251 85 ntBASIC-1.11□□□□□ -2.59
Trav3-4A0A075B654 Gm37438-201ENSMUST00000192813 393 ntBASIC-1.11□□□□□ -2.59
Trav3-4A0A075B654 Gm44468-201ENSMUST00000199516 105 ntBASIC-1.11□□□□□ -2.59
Trav3-4A0A075B654 AC154282.1-201ENSMUST00000223154 265 ntBASIC-1.11□□□□□ -2.59
Trav3-4A0A075B654 Gm22294-201ENSMUST00000083308 104 ntBASIC-1.11□□□□□ -2.59
Trav3-4A0A075B654 Zfp616-205ENSMUST00000178159 2964 ntAPPRIS P1 BASIC-1.11□□□□□ -2.59
Trav3-4A0A075B654 Gm25787-201ENSMUST00000104709 92 ntBASIC-1.12□□□□□ -2.59
Trav3-4A0A075B654 Gm11116-201ENSMUST00000113257 54 ntAPPRIS P1 TSL 5 BASIC-1.12□□□□□ -2.59
Trav3-4A0A075B654 Polr2k-ps-201ENSMUST00000120170 175 ntBASIC-1.12□□□□□ -2.59
Trav3-4A0A075B654 Gm25693-201ENSMUST00000175443 85 ntBASIC-1.12□□□□□ -2.59
Trav3-4A0A075B654 Gm18665-201ENSMUST00000189783 270 ntBASIC-1.12□□□□□ -2.59
Trav3-4A0A075B654 Gm5001-201ENSMUST00000204361 331 ntBASIC-1.12□□□□□ -2.59
Trav3-4A0A075B654 Gm44989-201ENSMUST00000204749 217 ntBASIC-1.12□□□□□ -2.59
Trav3-4A0A075B654 Gm23515-201ENSMUST00000082829 107 ntBASIC-1.12□□□□□ -2.59
Trav3-4A0A075B654 Gm25859-201ENSMUST00000083710 91 ntBASIC-1.12□□□□□ -2.59
Trav3-4A0A075B654 Gm25538-201ENSMUST00000101943 107 ntBASIC-1.13□□□□□ -2.59
Trav3-4A0A075B654 Gm25060-201ENSMUST00000157374 130 ntBASIC-1.13□□□□□ -2.59
Trav3-4A0A075B654 Gm23065-201ENSMUST00000158236 130 ntBASIC-1.13□□□□□ -2.59
Trav3-4A0A075B654 Gm25596-201ENSMUST00000178368 107 ntBASIC-1.13□□□□□ -2.59
Trav3-4A0A075B654 Gm38295-201ENSMUST00000191951 151 ntBASIC-1.13□□□□□ -2.59
Trav3-4A0A075B654 C030006N10Rik-201ENSMUST00000219077 517 ntBASIC-1.13□□□□□ -2.59
Trav3-4A0A075B654 Gm25611-201ENSMUST00000104017 133 ntBASIC-1.14□□□□□ -2.59
Trav3-4A0A075B654 Gm25472-201ENSMUST00000175454 78 ntBASIC-1.14□□□□□ -2.59
Trav3-4A0A075B654 AC125374.2-201ENSMUST00000214278 162 ntBASIC-1.14□□□□□ -2.59
Trav3-4A0A075B654 Gm23056-201ENSMUST00000082803 111 ntBASIC-1.14□□□□□ -2.59
Trav3-4A0A075B654 Gm24524-201ENSMUST00000082925 170 ntBASIC-1.14□□□□□ -2.59
Trav3-4A0A075B654 Gm22827-201ENSMUST00000083766 107 ntBASIC-1.14□□□□□ -2.59
Trav3-4A0A075B654 AC160984.1-201ENSMUST00000225855 3154 ntBASIC-1.14□□□□□ -2.59
Trav3-4A0A075B654 Gm25040-201ENSMUST00000103877 66 ntBASIC-1.15□□□□□ -2.59
Trav3-4A0A075B654 Gm25756-201ENSMUST00000103990 136 ntBASIC-1.15□□□□□ -2.59
Trav3-4A0A075B654 Scarna9-201ENSMUST00000104318 70 ntBASIC-1.15□□□□□ -2.59
Trav3-4A0A075B654 Gm10972-201ENSMUST00000107276 81 ntAPPRIS P1 TSL 5 BASIC-1.15□□□□□ -2.59
Trav3-4A0A075B654 Gm24290-201ENSMUST00000157634 96 ntBASIC-1.15□□□□□ -2.59
Trav3-4A0A075B654 Gm24847-201ENSMUST00000158032 108 ntBASIC-1.15□□□□□ -2.59
Retrieved 100 of 76,532 protein–RNA pairs in 168.7 ms