Protein–RNA interactions for Protein: A0A075B648

Trav12-3, T cell receptor alpha variable 12-3 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12-3A0A075B648 Gm13467-201ENSMUST00000145568 281 ntTSL 5 BASIC0.28□□□□□ -2.36
Trav12-3A0A075B648 Gm23466-201ENSMUST00000157133 106 ntBASIC0.28□□□□□ -2.36
Trav12-3A0A075B648 Gm23391-201ENSMUST00000157579 104 ntBASIC0.28□□□□□ -2.36
Trav12-3A0A075B648 Mir3968-201ENSMUST00000175355 100 ntBASIC0.28□□□□□ -2.36
Trav12-3A0A075B648 Gm24638-201ENSMUST00000179807 132 ntBASIC0.28□□□□□ -2.36
Trav12-3A0A075B648 Mir7068-201ENSMUST00000183439 74 ntBASIC0.28□□□□□ -2.36
Trav12-3A0A075B648 Gm25820-202ENSMUST00000197479 128 ntBASIC0.28□□□□□ -2.36
Trav12-3A0A075B648 Gm44462-201ENSMUST00000199696 129 ntBASIC0.28□□□□□ -2.36
Trav12-3A0A075B648 Sprr4-201ENSMUST00000062129 231 ntAPPRIS P1 BASIC0.28□□□□□ -2.36
Trav12-3A0A075B648 Gm26080-201ENSMUST00000104069 131 ntBASIC0.27□□□□□ -2.37
Trav12-3A0A075B648 Gm11322-201ENSMUST00000118095 435 ntBASIC0.27□□□□□ -2.37
Trav12-3A0A075B648 Gm22482-201ENSMUST00000122563 359 ntBASIC0.27□□□□□ -2.37
Trav12-3A0A075B648 Gm24509-201ENSMUST00000157086 101 ntBASIC0.27□□□□□ -2.37
Trav12-3A0A075B648 Gm25358-201ENSMUST00000157189 101 ntBASIC0.27□□□□□ -2.37
Trav12-3A0A075B648 Gm24076-201ENSMUST00000158179 94 ntBASIC0.27□□□□□ -2.37
Trav12-3A0A075B648 Gm23581-201ENSMUST00000158531 63 ntBASIC0.27□□□□□ -2.37
Trav12-3A0A075B648 Gm24549-201ENSMUST00000158647 139 ntBASIC0.27□□□□□ -2.37
Trav12-3A0A075B648 Gm22466-201ENSMUST00000175278 69 ntBASIC0.27□□□□□ -2.37
Trav12-3A0A075B648 Cdh4-202ENSMUST00000098996 69 ntTSL 5 BASIC0.27□□□□□ -2.37
Trav12-3A0A075B648 Zfp40-203ENSMUST00000140313 2754 ntTSL 1 (best) BASIC0.26□□□□□ -2.37
Trav12-3A0A075B648 Gm26076-201ENSMUST00000104065 105 ntBASIC0.26□□□□□ -2.37
Trav12-3A0A075B648 Gm26293-201ENSMUST00000104170 84 ntBASIC0.26□□□□□ -2.37
Trav12-3A0A075B648 Gm24500-201ENSMUST00000158447 124 ntBASIC0.26□□□□□ -2.37
Trav12-3A0A075B648 Gm23579-201ENSMUST00000158528 103 ntBASIC0.26□□□□□ -2.37
Trav12-3A0A075B648 Gm25707-201ENSMUST00000175120 96 ntBASIC0.26□□□□□ -2.37
Trav12-3A0A075B648 Mir7047-201ENSMUST00000184595 64 ntBASIC0.26□□□□□ -2.37
Trav12-3A0A075B648 Gm44373-201ENSMUST00000196112 169 ntBASIC0.26□□□□□ -2.37
Trav12-3A0A075B648 Gm45092-201ENSMUST00000205944 545 ntTSL 3 BASIC0.26□□□□□ -2.37
Trav12-3A0A075B648 Gm26123-201ENSMUST00000083363 135 ntBASIC0.26□□□□□ -2.37
Trav12-3A0A075B648 Mir466f-2-201ENSMUST00000104805 94 ntBASIC0.25□□□□□ -2.37
Trav12-3A0A075B648 Gm22706-201ENSMUST00000157907 112 ntBASIC0.25□□□□□ -2.37
Trav12-3A0A075B648 Gm22983-201ENSMUST00000158308 104 ntBASIC0.25□□□□□ -2.37
Trav12-3A0A075B648 Gm17172-201ENSMUST00000171782 190 ntTSL 3 BASIC0.25□□□□□ -2.37
Trav12-3A0A075B648 Gm25935-201ENSMUST00000178746 107 ntBASIC0.25□□□□□ -2.37
Trav12-3A0A075B648 Hspe1-ps2-201ENSMUST00000051437 312 ntBASIC0.25□□□□□ -2.37
Trav12-3A0A075B648 Mir532-201ENSMUST00000093630 96 ntBASIC0.25□□□□□ -2.37
Trav12-3A0A075B648 Gm23989-201ENSMUST00000117030 66 ntBASIC0.24□□□□□ -2.37
Trav12-3A0A075B648 Gm26152-201ENSMUST00000157427 101 ntBASIC0.24□□□□□ -2.37
Trav12-3A0A075B648 Gm24476-201ENSMUST00000157437 131 ntBASIC0.24□□□□□ -2.37
Trav12-3A0A075B648 Gm23838-201ENSMUST00000158067 162 ntBASIC0.24□□□□□ -2.37
Trav12-3A0A075B648 Gm24728-201ENSMUST00000158226 125 ntBASIC0.24□□□□□ -2.37
Trav12-3A0A075B648 Gm25300-201ENSMUST00000175284 84 ntBASIC0.24□□□□□ -2.37
Trav12-3A0A075B648 Mir6336-201ENSMUST00000183581 130 ntBASIC0.24□□□□□ -2.37
Trav12-3A0A075B648 Gm43406-201ENSMUST00000200356 334 ntBASIC0.24□□□□□ -2.37
Trav12-3A0A075B648 Gm43944-201ENSMUST00000205220 120 ntBASIC0.24□□□□□ -2.37
Trav12-3A0A075B648 AL603630.1-201ENSMUST00000214781 147 ntBASIC0.24□□□□□ -2.37
Trav12-3A0A075B648 Gm10719-202ENSMUST00000099049 675 ntAPPRIS ALT2 TSL 5 BASIC0.24□□□□□ -2.37
Trav12-3A0A075B648 Gm382-201ENSMUST00000096332 4070 ntAPPRIS P1 TSL 1 (best) BASIC0.23□□□□□ -2.37
Trav12-3A0A075B648 Gm25611-201ENSMUST00000104017 133 ntBASIC0.23□□□□□ -2.37
Trav12-3A0A075B648 Mir669i-201ENSMUST00000117007 127 ntBASIC0.23□□□□□ -2.37
Trav12-3A0A075B648 Gm13339-201ENSMUST00000120651 510 ntBASIC0.23□□□□□ -2.37
Trav12-3A0A075B648 Gm22999-201ENSMUST00000157082 88 ntBASIC0.23□□□□□ -2.37
Trav12-3A0A075B648 Gm25494-201ENSMUST00000158143 100 ntBASIC0.23□□□□□ -2.37
Trav12-3A0A075B648 Gm27672-201ENSMUST00000183751 204 ntBASIC0.23□□□□□ -2.37
Trav12-3A0A075B648 Gm28794-201ENSMUST00000185276 136 ntBASIC0.23□□□□□ -2.37
Trav12-3A0A075B648 Olfr797-ps1-201ENSMUST00000203614 415 ntBASIC0.23□□□□□ -2.37
Trav12-3A0A075B648 Gm45541-201ENSMUST00000210443 54 ntBASIC0.23□□□□□ -2.37
Trav12-3A0A075B648 Gm23451-201ENSMUST00000083328 122 ntBASIC0.23□□□□□ -2.37
Trav12-3A0A075B648 Gm24929-201ENSMUST00000083403 139 ntBASIC0.23□□□□□ -2.37
Trav12-3A0A075B648 Gm14327-202ENSMUST00000108935 1451 ntAPPRIS P1 TSL 1 (best) BASIC0.22□□□□□ -2.37
Trav12-3A0A075B648 AC159625.1-201ENSMUST00000220994 2625 ntBASIC0.22□□□□□ -2.37
Trav12-3A0A075B648 Gm22759-201ENSMUST00000102276 96 ntBASIC0.22□□□□□ -2.37
Trav12-3A0A075B648 Gm13345-201ENSMUST00000121928 228 ntBASIC0.22□□□□□ -2.37
Trav12-3A0A075B648 Gm24594-201ENSMUST00000122502 99 ntBASIC0.22□□□□□ -2.37
Trav12-3A0A075B648 Gm25771-201ENSMUST00000158565 144 ntBASIC0.22□□□□□ -2.37
Trav12-3A0A075B648 Gm3211-201ENSMUST00000172721 304 ntTSL 3 BASIC0.22□□□□□ -2.37
Trav12-3A0A075B648 Gm24415-201ENSMUST00000180218 107 ntBASIC0.22□□□□□ -2.37
Trav12-3A0A075B648 Mir669a-7-201ENSMUST00000180364 87 ntBASIC0.22□□□□□ -2.37
Trav12-3A0A075B648 Mir669a-6-201ENSMUST00000196127 87 ntBASIC0.22□□□□□ -2.37
Trav12-3A0A075B648 Mir669a-12-201ENSMUST00000197274 87 ntBASIC0.22□□□□□ -2.37
Trav12-3A0A075B648 Mir669a-5-201ENSMUST00000197439 87 ntBASIC0.22□□□□□ -2.37
Trav12-3A0A075B648 Mir669a-10-201ENSMUST00000197745 87 ntBASIC0.22□□□□□ -2.37
Trav12-3A0A075B648 Mir669a-11-201ENSMUST00000197952 87 ntBASIC0.22□□□□□ -2.37
Trav12-3A0A075B648 Mir669a-4-201ENSMUST00000198665 87 ntBASIC0.22□□□□□ -2.37
Trav12-3A0A075B648 Mir669a-9-201ENSMUST00000200087 87 ntBASIC0.22□□□□□ -2.37
Trav12-3A0A075B648 Mir669a-8-201ENSMUST00000200268 87 ntBASIC0.22□□□□□ -2.37
Trav12-3A0A075B648 Gm19572-201ENSMUST00000214326 338 ntBASIC0.22□□□□□ -2.37
Trav12-3A0A075B648 Gm19790-201ENSMUST00000214414 251 ntBASIC0.22□□□□□ -2.37
Trav12-3A0A075B648 AL627387.1-201ENSMUST00000226063 250 ntBASIC0.22□□□□□ -2.37
Trav12-3A0A075B648 AC154213.2-201ENSMUST00000227138 187 ntBASIC0.22□□□□□ -2.37
Trav12-3A0A075B648 Mir193a-201ENSMUST00000083461 66 ntBASIC0.22□□□□□ -2.37
Trav12-3A0A075B648 Gm12432-201ENSMUST00000119540 186 ntBASIC0.21□□□□□ -2.38
Trav12-3A0A075B648 Gm12837-201ENSMUST00000120131 373 ntBASIC0.21□□□□□ -2.38
Trav12-3A0A075B648 Gm11388-201ENSMUST00000120908 159 ntBASIC0.21□□□□□ -2.38
Trav12-3A0A075B648 Gm23329-201ENSMUST00000157415 108 ntBASIC0.21□□□□□ -2.38
Trav12-3A0A075B648 Gm27585-201ENSMUST00000183717 199 ntBASIC0.21□□□□□ -2.38
Trav12-3A0A075B648 Gm6003-201ENSMUST00000187903 463 ntBASIC0.21□□□□□ -2.38
Trav12-3A0A075B648 Gm22358-201ENSMUST00000082877 122 ntBASIC0.21□□□□□ -2.38
Trav12-3A0A075B648 Gm25188-201ENSMUST00000083913 122 ntBASIC0.21□□□□□ -2.38
Trav12-3A0A075B648 Gm8251-201ENSMUST00000168641 5985 ntAPPRIS P1 BASIC0.21□□□□□ -2.38
Trav12-3A0A075B648 Gm25168-201ENSMUST00000104189 132 ntBASIC0.2□□□□□ -2.38
Trav12-3A0A075B648 Gm25848-201ENSMUST00000116790 144 ntBASIC0.2□□□□□ -2.38
Trav12-3A0A075B648 Gm6952-201ENSMUST00000118629 159 ntBASIC0.2□□□□□ -2.38
Trav12-3A0A075B648 Gm25267-201ENSMUST00000158522 63 ntBASIC0.2□□□□□ -2.38
Trav12-3A0A075B648 Gm27475-201ENSMUST00000183420 61 ntBASIC0.2□□□□□ -2.38
Trav12-3A0A075B648 Mir7010-201ENSMUST00000183464 63 ntBASIC0.2□□□□□ -2.38
Trav12-3A0A075B648 Mir6390-201ENSMUST00000184405 129 ntBASIC0.2□□□□□ -2.38
Trav12-3A0A075B648 Mir7065-201ENSMUST00000185110 61 ntBASIC0.2□□□□□ -2.38
Trav12-3A0A075B648 AC133517.1-203ENSMUST00000225570 390 ntBASIC0.2□□□□□ -2.38
Trav12-3A0A075B648 Mir218-1-201ENSMUST00000083669 110 ntBASIC0.2□□□□□ -2.38
Retrieved 100 of 76,532 protein–RNA pairs in 82.1 ms