Protein–RNA interactions for Protein: Q9Z1P4

Lgr5, Leucine-rich repeat-containing G-protein coupled receptor 5, mousemouse

Predictions only

Length 907 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lgr5Q9Z1P4 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Lgr5Q9Z1P4 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Lgr5Q9Z1P4 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Lgr5Q9Z1P4 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Lgr5Q9Z1P4 Gm13312-201ENSMUST00000119631 718 ntBASIC20.28■□□□□ 0.84
Lgr5Q9Z1P4 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC20.28■□□□□ 0.84
Lgr5Q9Z1P4 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Lgr5Q9Z1P4 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC20.28■□□□□ 0.84
Lgr5Q9Z1P4 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
Lgr5Q9Z1P4 Gm6443-201ENSMUST00000203599 874 ntBASIC20.28■□□□□ 0.84
Lgr5Q9Z1P4 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Lgr5Q9Z1P4 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Lgr5Q9Z1P4 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Lgr5Q9Z1P4 Gfra2-202ENSMUST00000227633 1480 ntBASIC20.28■□□□□ 0.84
Lgr5Q9Z1P4 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Lgr5Q9Z1P4 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Lgr5Q9Z1P4 Gm43808-201ENSMUST00000202534 2065 ntBASIC20.28■□□□□ 0.84
Lgr5Q9Z1P4 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Lgr5Q9Z1P4 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Lgr5Q9Z1P4 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC20.27■□□□□ 0.84
Lgr5Q9Z1P4 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
Lgr5Q9Z1P4 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
Lgr5Q9Z1P4 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Lgr5Q9Z1P4 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
Lgr5Q9Z1P4 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC20.27■□□□□ 0.84
Lgr5Q9Z1P4 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Lgr5Q9Z1P4 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Lgr5Q9Z1P4 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Lgr5Q9Z1P4 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Lgr5Q9Z1P4 Gm43514-201ENSMUST00000198852 424 ntBASIC20.27■□□□□ 0.84
Lgr5Q9Z1P4 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Lgr5Q9Z1P4 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC20.27■□□□□ 0.84
Lgr5Q9Z1P4 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Lgr5Q9Z1P4 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Lgr5Q9Z1P4 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Lgr5Q9Z1P4 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Lgr5Q9Z1P4 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.83
Lgr5Q9Z1P4 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.83
Lgr5Q9Z1P4 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.83
Lgr5Q9Z1P4 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Lgr5Q9Z1P4 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC20.26■□□□□ 0.83
Lgr5Q9Z1P4 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC20.26■□□□□ 0.83
Lgr5Q9Z1P4 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Lgr5Q9Z1P4 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Lgr5Q9Z1P4 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC20.26■□□□□ 0.83
Lgr5Q9Z1P4 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC20.26■□□□□ 0.83
Lgr5Q9Z1P4 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC20.26■□□□□ 0.83
Lgr5Q9Z1P4 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Lgr5Q9Z1P4 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Lgr5Q9Z1P4 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC20.26■□□□□ 0.83
Lgr5Q9Z1P4 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Lgr5Q9Z1P4 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Lgr5Q9Z1P4 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Lgr5Q9Z1P4 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC20.26■□□□□ 0.83
Lgr5Q9Z1P4 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Lgr5Q9Z1P4 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Lgr5Q9Z1P4 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Lgr5Q9Z1P4 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Lgr5Q9Z1P4 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
Lgr5Q9Z1P4 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC20.25■□□□□ 0.83
Lgr5Q9Z1P4 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Lgr5Q9Z1P4 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC20.25■□□□□ 0.83
Lgr5Q9Z1P4 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC20.25■□□□□ 0.83
Lgr5Q9Z1P4 Gm12644-201ENSMUST00000119935 606 ntBASIC20.25■□□□□ 0.83
Lgr5Q9Z1P4 Gm27867-201ENSMUST00000184778 125 ntBASIC20.25■□□□□ 0.83
Lgr5Q9Z1P4 AC160338.1-201ENSMUST00000214232 705 ntBASIC20.25■□□□□ 0.83
Lgr5Q9Z1P4 AC108846.1-201ENSMUST00000214531 513 ntBASIC20.25■□□□□ 0.83
Lgr5Q9Z1P4 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Lgr5Q9Z1P4 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
Lgr5Q9Z1P4 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
Lgr5Q9Z1P4 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Lgr5Q9Z1P4 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
Lgr5Q9Z1P4 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Lgr5Q9Z1P4 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
Lgr5Q9Z1P4 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Lgr5Q9Z1P4 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
Lgr5Q9Z1P4 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Lgr5Q9Z1P4 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Lgr5Q9Z1P4 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
Lgr5Q9Z1P4 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Lgr5Q9Z1P4 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC20.23■□□□□ 0.83
Lgr5Q9Z1P4 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Lgr5Q9Z1P4 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Lgr5Q9Z1P4 Gm10052-201ENSMUST00000168019 960 ntBASIC20.23■□□□□ 0.83
Lgr5Q9Z1P4 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC20.23■□□□□ 0.83
Lgr5Q9Z1P4 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Lgr5Q9Z1P4 Gm7729-201ENSMUST00000050143 801 ntBASIC20.23■□□□□ 0.83
Lgr5Q9Z1P4 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Lgr5Q9Z1P4 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Lgr5Q9Z1P4 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
Lgr5Q9Z1P4 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC20.23■□□□□ 0.83
Lgr5Q9Z1P4 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Lgr5Q9Z1P4 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC20.22■□□□□ 0.83
Lgr5Q9Z1P4 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Lgr5Q9Z1P4 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
Lgr5Q9Z1P4 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC20.22■□□□□ 0.83
Lgr5Q9Z1P4 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Lgr5Q9Z1P4 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Lgr5Q9Z1P4 Gm27525-201ENSMUST00000184465 107 ntBASIC20.22■□□□□ 0.83
Lgr5Q9Z1P4 Gm6296-201ENSMUST00000222599 943 ntBASIC20.22■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 54.2 ms