Protein–RNA interactions for Protein: Q9Z0H8

Clip2, CAP-Gly domain-containing linker protein 2, mousemouse

Predictions only

Length 1,047 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clip2Q9Z0H8 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Clip2Q9Z0H8 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Clip2Q9Z0H8 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC19.73■□□□□ 0.75
Clip2Q9Z0H8 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Clip2Q9Z0H8 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Clip2Q9Z0H8 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Clip2Q9Z0H8 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Clip2Q9Z0H8 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Clip2Q9Z0H8 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Clip2Q9Z0H8 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Clip2Q9Z0H8 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Clip2Q9Z0H8 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Clip2Q9Z0H8 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Clip2Q9Z0H8 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC19.72■□□□□ 0.75
Clip2Q9Z0H8 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Clip2Q9Z0H8 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Clip2Q9Z0H8 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Clip2Q9Z0H8 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Clip2Q9Z0H8 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Clip2Q9Z0H8 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Clip2Q9Z0H8 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Clip2Q9Z0H8 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Clip2Q9Z0H8 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Clip2Q9Z0H8 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Clip2Q9Z0H8 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC19.71■□□□□ 0.75
Clip2Q9Z0H8 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Clip2Q9Z0H8 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Clip2Q9Z0H8 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Clip2Q9Z0H8 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Clip2Q9Z0H8 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC19.71■□□□□ 0.75
Clip2Q9Z0H8 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Clip2Q9Z0H8 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC19.71■□□□□ 0.75
Clip2Q9Z0H8 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Clip2Q9Z0H8 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Clip2Q9Z0H8 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Clip2Q9Z0H8 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Clip2Q9Z0H8 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Clip2Q9Z0H8 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Clip2Q9Z0H8 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Clip2Q9Z0H8 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Clip2Q9Z0H8 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Clip2Q9Z0H8 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Clip2Q9Z0H8 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Clip2Q9Z0H8 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Clip2Q9Z0H8 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Clip2Q9Z0H8 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
Clip2Q9Z0H8 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Clip2Q9Z0H8 Gm9013-201ENSMUST00000132939 882 ntBASIC19.7■□□□□ 0.74
Clip2Q9Z0H8 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC19.7■□□□□ 0.74
Clip2Q9Z0H8 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Clip2Q9Z0H8 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
Clip2Q9Z0H8 Gm5587-201ENSMUST00000206270 674 ntBASIC19.7■□□□□ 0.74
Clip2Q9Z0H8 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Clip2Q9Z0H8 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC19.7■□□□□ 0.74
Clip2Q9Z0H8 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Clip2Q9Z0H8 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Clip2Q9Z0H8 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Clip2Q9Z0H8 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
Clip2Q9Z0H8 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Clip2Q9Z0H8 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Clip2Q9Z0H8 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Clip2Q9Z0H8 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Clip2Q9Z0H8 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
Clip2Q9Z0H8 Tfap2a-209ENSMUST00000225180 1828 ntBASIC19.69■□□□□ 0.74
Clip2Q9Z0H8 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Clip2Q9Z0H8 Gm44832-201ENSMUST00000208849 2303 ntBASIC19.69■□□□□ 0.74
Clip2Q9Z0H8 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Clip2Q9Z0H8 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Clip2Q9Z0H8 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
Clip2Q9Z0H8 Gm16499-203ENSMUST00000204633 2177 ntBASIC19.69■□□□□ 0.74
Clip2Q9Z0H8 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC19.69■□□□□ 0.74
Clip2Q9Z0H8 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Clip2Q9Z0H8 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Clip2Q9Z0H8 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Clip2Q9Z0H8 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC19.69■□□□□ 0.74
Clip2Q9Z0H8 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
Clip2Q9Z0H8 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Clip2Q9Z0H8 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Clip2Q9Z0H8 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Clip2Q9Z0H8 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Clip2Q9Z0H8 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Clip2Q9Z0H8 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Clip2Q9Z0H8 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Clip2Q9Z0H8 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC19.68■□□□□ 0.74
Clip2Q9Z0H8 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Clip2Q9Z0H8 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
Clip2Q9Z0H8 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Clip2Q9Z0H8 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Clip2Q9Z0H8 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Clip2Q9Z0H8 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
Clip2Q9Z0H8 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Clip2Q9Z0H8 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Clip2Q9Z0H8 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Clip2Q9Z0H8 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Clip2Q9Z0H8 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Clip2Q9Z0H8 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Clip2Q9Z0H8 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Clip2Q9Z0H8 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Clip2Q9Z0H8 Gm37811-201ENSMUST00000192416 2601 ntBASIC19.68■□□□□ 0.74
Clip2Q9Z0H8 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 23 ms