Protein–RNA interactions for Protein: Q9Z0H3

Smarcb1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1, mousemouse

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcb1Q9Z0H3 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Smarcb1Q9Z0H3 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Smarcb1Q9Z0H3 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Smarcb1Q9Z0H3 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Smarcb1Q9Z0H3 Phf7-203ENSMUST00000226565 1971 ntBASIC17.58■□□□□ 0.4
Smarcb1Q9Z0H3 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC17.58■□□□□ 0.4
Smarcb1Q9Z0H3 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Smarcb1Q9Z0H3 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Smarcb1Q9Z0H3 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
Smarcb1Q9Z0H3 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Smarcb1Q9Z0H3 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Smarcb1Q9Z0H3 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Smarcb1Q9Z0H3 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Smarcb1Q9Z0H3 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
Smarcb1Q9Z0H3 AC159205.3-201ENSMUST00000224614 874 ntBASIC17.57■□□□□ 0.4
Smarcb1Q9Z0H3 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Smarcb1Q9Z0H3 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Smarcb1Q9Z0H3 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC17.57■□□□□ 0.4
Smarcb1Q9Z0H3 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Smarcb1Q9Z0H3 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Smarcb1Q9Z0H3 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC17.57■□□□□ 0.4
Smarcb1Q9Z0H3 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Smarcb1Q9Z0H3 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Smarcb1Q9Z0H3 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Smarcb1Q9Z0H3 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Smarcb1Q9Z0H3 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Smarcb1Q9Z0H3 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Smarcb1Q9Z0H3 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Smarcb1Q9Z0H3 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Smarcb1Q9Z0H3 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Smarcb1Q9Z0H3 Gm27357-201ENSMUST00000183754 135 ntBASIC17.56■□□□□ 0.4
Smarcb1Q9Z0H3 Gm17807-201ENSMUST00000186869 298 ntBASIC17.56■□□□□ 0.4
Smarcb1Q9Z0H3 Gm29707-201ENSMUST00000196325 491 ntBASIC17.56■□□□□ 0.4
Smarcb1Q9Z0H3 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Smarcb1Q9Z0H3 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Smarcb1Q9Z0H3 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Smarcb1Q9Z0H3 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Smarcb1Q9Z0H3 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Smarcb1Q9Z0H3 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Smarcb1Q9Z0H3 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Smarcb1Q9Z0H3 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Smarcb1Q9Z0H3 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Smarcb1Q9Z0H3 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Smarcb1Q9Z0H3 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Smarcb1Q9Z0H3 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Smarcb1Q9Z0H3 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Smarcb1Q9Z0H3 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Smarcb1Q9Z0H3 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Smarcb1Q9Z0H3 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Smarcb1Q9Z0H3 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC17.55■□□□□ 0.4
Smarcb1Q9Z0H3 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Smarcb1Q9Z0H3 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
Smarcb1Q9Z0H3 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Smarcb1Q9Z0H3 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Smarcb1Q9Z0H3 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Smarcb1Q9Z0H3 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Smarcb1Q9Z0H3 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Smarcb1Q9Z0H3 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC17.55■□□□□ 0.4
Smarcb1Q9Z0H3 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Smarcb1Q9Z0H3 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Smarcb1Q9Z0H3 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Smarcb1Q9Z0H3 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Smarcb1Q9Z0H3 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Smarcb1Q9Z0H3 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Smarcb1Q9Z0H3 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Smarcb1Q9Z0H3 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Smarcb1Q9Z0H3 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Smarcb1Q9Z0H3 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Smarcb1Q9Z0H3 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC17.54■□□□□ 0.4
Smarcb1Q9Z0H3 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Smarcb1Q9Z0H3 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC17.54■□□□□ 0.4
Smarcb1Q9Z0H3 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC17.54■□□□□ 0.4
Smarcb1Q9Z0H3 Gm44450-201ENSMUST00000199528 114 ntBASIC17.54■□□□□ 0.4
Smarcb1Q9Z0H3 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Smarcb1Q9Z0H3 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC17.54■□□□□ 0.4
Smarcb1Q9Z0H3 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Smarcb1Q9Z0H3 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Smarcb1Q9Z0H3 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Smarcb1Q9Z0H3 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Smarcb1Q9Z0H3 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Smarcb1Q9Z0H3 Fcho2-208ENSMUST00000224992 2964 ntBASIC17.54■□□□□ 0.4
Smarcb1Q9Z0H3 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Smarcb1Q9Z0H3 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC17.54■□□□□ 0.4
Smarcb1Q9Z0H3 Gm42939-201ENSMUST00000197514 2205 ntBASIC17.53■□□□□ 0.4
Smarcb1Q9Z0H3 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Smarcb1Q9Z0H3 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Smarcb1Q9Z0H3 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Smarcb1Q9Z0H3 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Smarcb1Q9Z0H3 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Smarcb1Q9Z0H3 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Smarcb1Q9Z0H3 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Smarcb1Q9Z0H3 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Smarcb1Q9Z0H3 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC17.53■□□□□ 0.4
Smarcb1Q9Z0H3 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC17.53■□□□□ 0.4
Smarcb1Q9Z0H3 Gm18669-201ENSMUST00000216049 778 ntBASIC17.53■□□□□ 0.4
Smarcb1Q9Z0H3 Otx2os1-206ENSMUST00000228153 787 ntBASIC17.53■□□□□ 0.4
Smarcb1Q9Z0H3 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Smarcb1Q9Z0H3 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Smarcb1Q9Z0H3 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Smarcb1Q9Z0H3 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms