Protein–RNA interactions for Protein: Q9WU38

Scnn1b, Amiloride-sensitive sodium channel subunit beta, mousemouse

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scnn1bQ9WU38 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Scnn1bQ9WU38 AC154855.1-201ENSMUST00000227353 1458 ntBASIC18.7■□□□□ 0.58
Scnn1bQ9WU38 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Scnn1bQ9WU38 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Scnn1bQ9WU38 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC18.7■□□□□ 0.58
Scnn1bQ9WU38 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Scnn1bQ9WU38 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Scnn1bQ9WU38 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Scnn1bQ9WU38 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Scnn1bQ9WU38 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Scnn1bQ9WU38 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Scnn1bQ9WU38 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC18.69■□□□□ 0.58
Scnn1bQ9WU38 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Scnn1bQ9WU38 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Scnn1bQ9WU38 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Scnn1bQ9WU38 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Scnn1bQ9WU38 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Scnn1bQ9WU38 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Scnn1bQ9WU38 Gm7856-201ENSMUST00000117514 1493 ntBASIC18.69■□□□□ 0.58
Scnn1bQ9WU38 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Scnn1bQ9WU38 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Scnn1bQ9WU38 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Scnn1bQ9WU38 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Scnn1bQ9WU38 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Scnn1bQ9WU38 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Scnn1bQ9WU38 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Scnn1bQ9WU38 Gm28196-201ENSMUST00000187719 640 ntBASIC18.68■□□□□ 0.58
Scnn1bQ9WU38 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Scnn1bQ9WU38 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Scnn1bQ9WU38 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
Scnn1bQ9WU38 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC18.68■□□□□ 0.58
Scnn1bQ9WU38 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Scnn1bQ9WU38 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Scnn1bQ9WU38 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Scnn1bQ9WU38 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Scnn1bQ9WU38 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Scnn1bQ9WU38 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Scnn1bQ9WU38 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC18.67■□□□□ 0.58
Scnn1bQ9WU38 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Scnn1bQ9WU38 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC18.67■□□□□ 0.58
Scnn1bQ9WU38 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Scnn1bQ9WU38 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Scnn1bQ9WU38 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Scnn1bQ9WU38 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Scnn1bQ9WU38 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Scnn1bQ9WU38 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC18.67■□□□□ 0.58
Scnn1bQ9WU38 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Scnn1bQ9WU38 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC18.67■□□□□ 0.58
Scnn1bQ9WU38 Gm15372-201ENSMUST00000120729 834 ntBASIC18.67■□□□□ 0.58
Scnn1bQ9WU38 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC18.67■□□□□ 0.58
Scnn1bQ9WU38 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Scnn1bQ9WU38 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC18.67■□□□□ 0.58
Scnn1bQ9WU38 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC18.67■□□□□ 0.58
Scnn1bQ9WU38 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC18.67■□□□□ 0.58
Scnn1bQ9WU38 Gm44882-201ENSMUST00000205702 802 ntBASIC18.67■□□□□ 0.58
Scnn1bQ9WU38 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC18.67■□□□□ 0.58
Scnn1bQ9WU38 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC18.67■□□□□ 0.58
Scnn1bQ9WU38 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC18.67■□□□□ 0.58
Scnn1bQ9WU38 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Scnn1bQ9WU38 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Scnn1bQ9WU38 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Scnn1bQ9WU38 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Scnn1bQ9WU38 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Scnn1bQ9WU38 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Scnn1bQ9WU38 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC18.67■□□□□ 0.58
Scnn1bQ9WU38 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Scnn1bQ9WU38 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC18.67■□□□□ 0.58
Scnn1bQ9WU38 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Scnn1bQ9WU38 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Scnn1bQ9WU38 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Scnn1bQ9WU38 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Scnn1bQ9WU38 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Scnn1bQ9WU38 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC18.66■□□□□ 0.58
Scnn1bQ9WU38 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Scnn1bQ9WU38 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC18.66■□□□□ 0.58
Scnn1bQ9WU38 AC161829.1-201ENSMUST00000220298 281 ntBASIC18.66■□□□□ 0.58
Scnn1bQ9WU38 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Scnn1bQ9WU38 Rps4l-201ENSMUST00000071745 943 ntBASIC18.66■□□□□ 0.58
Scnn1bQ9WU38 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Scnn1bQ9WU38 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Scnn1bQ9WU38 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Scnn1bQ9WU38 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Scnn1bQ9WU38 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Scnn1bQ9WU38 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC18.65■□□□□ 0.58
Scnn1bQ9WU38 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Scnn1bQ9WU38 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Scnn1bQ9WU38 AC122335.2-201ENSMUST00000213901 6181 ntBASIC18.65■□□□□ 0.58
Scnn1bQ9WU38 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC18.65■□□□□ 0.58
Scnn1bQ9WU38 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Scnn1bQ9WU38 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Scnn1bQ9WU38 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Scnn1bQ9WU38 Tgds-204ENSMUST00000228543 1594 ntBASIC18.65■□□□□ 0.58
Scnn1bQ9WU38 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Scnn1bQ9WU38 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Scnn1bQ9WU38 Gm7935-201ENSMUST00000100555 1278 ntBASIC18.65■□□□□ 0.58
Scnn1bQ9WU38 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Scnn1bQ9WU38 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC18.65■□□□□ 0.58
Scnn1bQ9WU38 Gm1401-201ENSMUST00000122048 772 ntBASIC18.65■□□□□ 0.58
Scnn1bQ9WU38 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC18.65■□□□□ 0.58
Scnn1bQ9WU38 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms