Protein–RNA interactions for Protein: Q9WTU3

Scn8a, Sodium channel protein type 8 subunit alpha, mousemouse

Predictions only

Length 1,978 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8aQ9WTU3 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC17.07■□□□□ 0.32
Scn8aQ9WTU3 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC17.07■□□□□ 0.32
Scn8aQ9WTU3 Gm10459-201ENSMUST00000202708 1155 ntBASIC17.07■□□□□ 0.32
Scn8aQ9WTU3 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Scn8aQ9WTU3 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Scn8aQ9WTU3 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC17.06■□□□□ 0.32
Scn8aQ9WTU3 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Scn8aQ9WTU3 Gfra2-202ENSMUST00000227633 1480 ntBASIC17.06■□□□□ 0.32
Scn8aQ9WTU3 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Scn8aQ9WTU3 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC17.06■□□□□ 0.32
Scn8aQ9WTU3 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Scn8aQ9WTU3 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Scn8aQ9WTU3 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Scn8aQ9WTU3 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Scn8aQ9WTU3 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Scn8aQ9WTU3 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Scn8aQ9WTU3 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Scn8aQ9WTU3 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Scn8aQ9WTU3 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Scn8aQ9WTU3 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Scn8aQ9WTU3 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Scn8aQ9WTU3 Gm27704-201ENSMUST00000185094 107 ntBASIC17.06■□□□□ 0.32
Scn8aQ9WTU3 AC107711.5-202ENSMUST00000226429 702 ntBASIC17.06■□□□□ 0.32
Scn8aQ9WTU3 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Scn8aQ9WTU3 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Scn8aQ9WTU3 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Scn8aQ9WTU3 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Scn8aQ9WTU3 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Scn8aQ9WTU3 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Scn8aQ9WTU3 Gm43294-201ENSMUST00000202850 2490 ntBASIC17.05■□□□□ 0.32
Scn8aQ9WTU3 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Scn8aQ9WTU3 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Scn8aQ9WTU3 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Scn8aQ9WTU3 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Scn8aQ9WTU3 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Scn8aQ9WTU3 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Scn8aQ9WTU3 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Scn8aQ9WTU3 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Scn8aQ9WTU3 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Scn8aQ9WTU3 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Scn8aQ9WTU3 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Scn8aQ9WTU3 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Scn8aQ9WTU3 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Scn8aQ9WTU3 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Scn8aQ9WTU3 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Scn8aQ9WTU3 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Scn8aQ9WTU3 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Scn8aQ9WTU3 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Scn8aQ9WTU3 Gm27357-201ENSMUST00000183754 135 ntBASIC17.04■□□□□ 0.32
Scn8aQ9WTU3 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Scn8aQ9WTU3 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Scn8aQ9WTU3 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Scn8aQ9WTU3 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Scn8aQ9WTU3 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Scn8aQ9WTU3 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Scn8aQ9WTU3 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
Scn8aQ9WTU3 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC17.04■□□□□ 0.32
Scn8aQ9WTU3 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Scn8aQ9WTU3 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Scn8aQ9WTU3 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC17.03■□□□□ 0.32
Scn8aQ9WTU3 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC17.03■□□□□ 0.32
Scn8aQ9WTU3 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Scn8aQ9WTU3 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Scn8aQ9WTU3 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Scn8aQ9WTU3 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Scn8aQ9WTU3 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Scn8aQ9WTU3 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Scn8aQ9WTU3 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Scn8aQ9WTU3 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Scn8aQ9WTU3 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Scn8aQ9WTU3 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Scn8aQ9WTU3 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC17.02■□□□□ 0.32
Scn8aQ9WTU3 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Scn8aQ9WTU3 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Scn8aQ9WTU3 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Scn8aQ9WTU3 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC17.02■□□□□ 0.32
Scn8aQ9WTU3 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Scn8aQ9WTU3 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Scn8aQ9WTU3 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Scn8aQ9WTU3 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Scn8aQ9WTU3 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC17.02■□□□□ 0.32
Scn8aQ9WTU3 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
Scn8aQ9WTU3 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC17.02■□□□□ 0.32
Scn8aQ9WTU3 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Scn8aQ9WTU3 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Scn8aQ9WTU3 Gm17971-201ENSMUST00000190239 806 ntBASIC17.02■□□□□ 0.31
Scn8aQ9WTU3 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Scn8aQ9WTU3 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Scn8aQ9WTU3 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Scn8aQ9WTU3 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Scn8aQ9WTU3 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Scn8aQ9WTU3 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Scn8aQ9WTU3 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Scn8aQ9WTU3 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Scn8aQ9WTU3 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Scn8aQ9WTU3 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Scn8aQ9WTU3 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Scn8aQ9WTU3 Gm15794-201ENSMUST00000120182 631 ntBASIC17.01■□□□□ 0.31
Scn8aQ9WTU3 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Scn8aQ9WTU3 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms