Protein–RNA interactions for Protein: Q9ERD7

Tubb3, Tubulin beta-3 chain, mousemouse

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubb3Q9ERD7 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Tubb3Q9ERD7 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Tubb3Q9ERD7 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Tubb3Q9ERD7 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Tubb3Q9ERD7 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Tubb3Q9ERD7 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC16.85■□□□□ 0.29
Tubb3Q9ERD7 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Tubb3Q9ERD7 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Tubb3Q9ERD7 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Tubb3Q9ERD7 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Tubb3Q9ERD7 Gm7712-202ENSMUST00000222331 1510 ntBASIC16.85■□□□□ 0.29
Tubb3Q9ERD7 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Tubb3Q9ERD7 AC122335.2-201ENSMUST00000213901 6181 ntBASIC16.84■□□□□ 0.29
Tubb3Q9ERD7 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Tubb3Q9ERD7 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Tubb3Q9ERD7 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Tubb3Q9ERD7 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Tubb3Q9ERD7 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Tubb3Q9ERD7 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
Tubb3Q9ERD7 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Tubb3Q9ERD7 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Tubb3Q9ERD7 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC16.84■□□□□ 0.29
Tubb3Q9ERD7 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Tubb3Q9ERD7 Timm23-208ENSMUST00000226683 750 ntBASIC16.84■□□□□ 0.29
Tubb3Q9ERD7 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Tubb3Q9ERD7 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Tubb3Q9ERD7 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
Tubb3Q9ERD7 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Tubb3Q9ERD7 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Tubb3Q9ERD7 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Tubb3Q9ERD7 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC16.84■□□□□ 0.29
Tubb3Q9ERD7 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Tubb3Q9ERD7 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Tubb3Q9ERD7 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Tubb3Q9ERD7 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC16.84■□□□□ 0.29
Tubb3Q9ERD7 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Tubb3Q9ERD7 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.29
Tubb3Q9ERD7 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Tubb3Q9ERD7 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Tubb3Q9ERD7 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC16.83■□□□□ 0.28
Tubb3Q9ERD7 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Tubb3Q9ERD7 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Tubb3Q9ERD7 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Tubb3Q9ERD7 Gm29994-201ENSMUST00000195495 1193 ntBASIC16.83■□□□□ 0.28
Tubb3Q9ERD7 Gm21814-202ENSMUST00000203277 873 ntBASIC16.83■□□□□ 0.28
Tubb3Q9ERD7 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Tubb3Q9ERD7 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Tubb3Q9ERD7 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Tubb3Q9ERD7 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Tubb3Q9ERD7 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Tubb3Q9ERD7 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Tubb3Q9ERD7 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Tubb3Q9ERD7 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Tubb3Q9ERD7 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Tubb3Q9ERD7 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Tubb3Q9ERD7 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Tubb3Q9ERD7 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Tubb3Q9ERD7 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Tubb3Q9ERD7 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Tubb3Q9ERD7 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Tubb3Q9ERD7 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Tubb3Q9ERD7 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Tubb3Q9ERD7 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Tubb3Q9ERD7 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
Tubb3Q9ERD7 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Tubb3Q9ERD7 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Tubb3Q9ERD7 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Tubb3Q9ERD7 Gm7977-201ENSMUST00000193787 748 ntBASIC16.82■□□□□ 0.28
Tubb3Q9ERD7 Gm30025-201ENSMUST00000218555 728 ntBASIC16.82■□□□□ 0.28
Tubb3Q9ERD7 Odf3b-204ENSMUST00000227834 930 ntBASIC16.82■□□□□ 0.28
Tubb3Q9ERD7 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Tubb3Q9ERD7 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Tubb3Q9ERD7 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Tubb3Q9ERD7 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Tubb3Q9ERD7 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Tubb3Q9ERD7 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Tubb3Q9ERD7 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Tubb3Q9ERD7 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC16.81■□□□□ 0.28
Tubb3Q9ERD7 Gm36858-201ENSMUST00000194501 2391 ntBASIC16.81■□□□□ 0.28
Tubb3Q9ERD7 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Tubb3Q9ERD7 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Tubb3Q9ERD7 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Tubb3Q9ERD7 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Tubb3Q9ERD7 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Tubb3Q9ERD7 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Tubb3Q9ERD7 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC16.81■□□□□ 0.28
Tubb3Q9ERD7 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Tubb3Q9ERD7 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Tubb3Q9ERD7 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Tubb3Q9ERD7 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Tubb3Q9ERD7 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Tubb3Q9ERD7 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Tubb3Q9ERD7 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Tubb3Q9ERD7 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Tubb3Q9ERD7 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Tubb3Q9ERD7 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Tubb3Q9ERD7 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Tubb3Q9ERD7 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Tubb3Q9ERD7 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Tubb3Q9ERD7 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 48.7 ms