Protein–RNA interactions for Protein: Q9ER80

Rtp4, Receptor-transporting protein 4, mousemouse

Known RBP Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtp4Q9ER80 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Rtp4Q9ER80 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
Rtp4Q9ER80 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Rtp4Q9ER80 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Rtp4Q9ER80 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Rtp4Q9ER80 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC15.88■□□□□ 0.13
Rtp4Q9ER80 Gm16401-202ENSMUST00000197463 2074 ntBASIC15.88■□□□□ 0.13
Rtp4Q9ER80 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
Rtp4Q9ER80 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Rtp4Q9ER80 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
Rtp4Q9ER80 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Rtp4Q9ER80 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Rtp4Q9ER80 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC15.88■□□□□ 0.13
Rtp4Q9ER80 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Rtp4Q9ER80 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Rtp4Q9ER80 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Rtp4Q9ER80 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC15.88■□□□□ 0.13
Rtp4Q9ER80 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Rtp4Q9ER80 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Rtp4Q9ER80 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
Rtp4Q9ER80 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
Rtp4Q9ER80 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Rtp4Q9ER80 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Rtp4Q9ER80 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
Rtp4Q9ER80 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
Rtp4Q9ER80 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
Rtp4Q9ER80 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
Rtp4Q9ER80 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Rtp4Q9ER80 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Rtp4Q9ER80 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Rtp4Q9ER80 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Rtp4Q9ER80 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Rtp4Q9ER80 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC15.87■□□□□ 0.13
Rtp4Q9ER80 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC15.87■□□□□ 0.13
Rtp4Q9ER80 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Rtp4Q9ER80 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
Rtp4Q9ER80 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC15.87■□□□□ 0.13
Rtp4Q9ER80 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
Rtp4Q9ER80 AC125311.2-201ENSMUST00000227477 1940 ntBASIC15.87■□□□□ 0.13
Rtp4Q9ER80 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Rtp4Q9ER80 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Rtp4Q9ER80 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Rtp4Q9ER80 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Rtp4Q9ER80 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
Rtp4Q9ER80 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Rtp4Q9ER80 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Rtp4Q9ER80 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
Rtp4Q9ER80 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC15.87■□□□□ 0.13
Rtp4Q9ER80 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
Rtp4Q9ER80 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Rtp4Q9ER80 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Rtp4Q9ER80 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Rtp4Q9ER80 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Rtp4Q9ER80 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
Rtp4Q9ER80 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Rtp4Q9ER80 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Rtp4Q9ER80 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Rtp4Q9ER80 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Rtp4Q9ER80 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC15.86■□□□□ 0.13
Rtp4Q9ER80 Gm4217-201ENSMUST00000182243 1002 ntBASIC15.86■□□□□ 0.13
Rtp4Q9ER80 Gm45058-201ENSMUST00000205810 766 ntBASIC15.86■□□□□ 0.13
Rtp4Q9ER80 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Rtp4Q9ER80 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
Rtp4Q9ER80 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Rtp4Q9ER80 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Rtp4Q9ER80 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Rtp4Q9ER80 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Rtp4Q9ER80 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Rtp4Q9ER80 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
Rtp4Q9ER80 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Rtp4Q9ER80 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Rtp4Q9ER80 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Rtp4Q9ER80 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
Rtp4Q9ER80 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Rtp4Q9ER80 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Rtp4Q9ER80 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC15.85■□□□□ 0.13
Rtp4Q9ER80 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC15.85■□□□□ 0.13
Rtp4Q9ER80 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Rtp4Q9ER80 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Rtp4Q9ER80 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Rtp4Q9ER80 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Rtp4Q9ER80 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Rtp4Q9ER80 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Rtp4Q9ER80 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Rtp4Q9ER80 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Rtp4Q9ER80 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
Rtp4Q9ER80 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Rtp4Q9ER80 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Rtp4Q9ER80 Gm29791-202ENSMUST00000207888 369 ntBASIC15.85■□□□□ 0.13
Rtp4Q9ER80 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
Rtp4Q9ER80 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Rtp4Q9ER80 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC15.85■□□□□ 0.13
Rtp4Q9ER80 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Rtp4Q9ER80 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
Rtp4Q9ER80 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC15.85■□□□□ 0.13
Rtp4Q9ER80 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC15.85■□□□□ 0.13
Rtp4Q9ER80 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Rtp4Q9ER80 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Rtp4Q9ER80 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Rtp4Q9ER80 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms