Protein–RNA interactions for Protein: Q9EPU0

Upf1, Regulator of nonsense transcripts 1, mousemouse

Known RBP Predictions only

Length 1,124 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf1Q9EPU0 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC19.29■□□□□ 0.68
Upf1Q9EPU0 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Upf1Q9EPU0 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Upf1Q9EPU0 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Upf1Q9EPU0 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Upf1Q9EPU0 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Upf1Q9EPU0 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC19.29■□□□□ 0.68
Upf1Q9EPU0 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Upf1Q9EPU0 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Upf1Q9EPU0 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Upf1Q9EPU0 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Upf1Q9EPU0 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC19.28■□□□□ 0.68
Upf1Q9EPU0 Gm27494-201ENSMUST00000184735 189 ntBASIC19.28■□□□□ 0.68
Upf1Q9EPU0 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Upf1Q9EPU0 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Upf1Q9EPU0 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Upf1Q9EPU0 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC19.28■□□□□ 0.68
Upf1Q9EPU0 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC19.28■□□□□ 0.68
Upf1Q9EPU0 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Upf1Q9EPU0 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Upf1Q9EPU0 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Upf1Q9EPU0 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Upf1Q9EPU0 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Upf1Q9EPU0 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Upf1Q9EPU0 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Upf1Q9EPU0 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
Upf1Q9EPU0 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC19.27■□□□□ 0.68
Upf1Q9EPU0 Gm12497-201ENSMUST00000138778 237 ntBASIC19.27■□□□□ 0.68
Upf1Q9EPU0 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Upf1Q9EPU0 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
Upf1Q9EPU0 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC19.27■□□□□ 0.68
Upf1Q9EPU0 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Upf1Q9EPU0 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC19.27■□□□□ 0.68
Upf1Q9EPU0 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Upf1Q9EPU0 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Upf1Q9EPU0 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Upf1Q9EPU0 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC19.27■□□□□ 0.68
Upf1Q9EPU0 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Upf1Q9EPU0 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Upf1Q9EPU0 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Upf1Q9EPU0 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Upf1Q9EPU0 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Upf1Q9EPU0 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC19.27■□□□□ 0.68
Upf1Q9EPU0 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC19.27■□□□□ 0.67
Upf1Q9EPU0 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Upf1Q9EPU0 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC19.26■□□□□ 0.67
Upf1Q9EPU0 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Upf1Q9EPU0 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Upf1Q9EPU0 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Upf1Q9EPU0 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC19.26■□□□□ 0.67
Upf1Q9EPU0 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Upf1Q9EPU0 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Upf1Q9EPU0 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Upf1Q9EPU0 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC19.26■□□□□ 0.67
Upf1Q9EPU0 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Upf1Q9EPU0 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Upf1Q9EPU0 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Upf1Q9EPU0 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Upf1Q9EPU0 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Upf1Q9EPU0 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Upf1Q9EPU0 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Upf1Q9EPU0 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Upf1Q9EPU0 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Upf1Q9EPU0 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Upf1Q9EPU0 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Upf1Q9EPU0 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Upf1Q9EPU0 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Upf1Q9EPU0 Gm15653-201ENSMUST00000119247 907 ntBASIC19.25■□□□□ 0.67
Upf1Q9EPU0 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Upf1Q9EPU0 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Upf1Q9EPU0 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC19.25■□□□□ 0.67
Upf1Q9EPU0 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Upf1Q9EPU0 Gm6277-202ENSMUST00000224036 2779 ntBASIC19.25■□□□□ 0.67
Upf1Q9EPU0 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Upf1Q9EPU0 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Upf1Q9EPU0 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Upf1Q9EPU0 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Upf1Q9EPU0 Gm19721-201ENSMUST00000195284 1764 ntBASIC19.24■□□□□ 0.67
Upf1Q9EPU0 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Upf1Q9EPU0 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
Upf1Q9EPU0 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Upf1Q9EPU0 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Upf1Q9EPU0 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Upf1Q9EPU0 Crym-201ENSMUST00000033198 1383 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Upf1Q9EPU0 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Upf1Q9EPU0 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC19.24■□□□□ 0.67
Upf1Q9EPU0 Gm4459-201ENSMUST00000118750 468 ntBASIC19.24■□□□□ 0.67
Upf1Q9EPU0 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Upf1Q9EPU0 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Upf1Q9EPU0 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Upf1Q9EPU0 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Upf1Q9EPU0 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Upf1Q9EPU0 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Upf1Q9EPU0 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Upf1Q9EPU0 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Upf1Q9EPU0 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Upf1Q9EPU0 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Upf1Q9EPU0 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Upf1Q9EPU0 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Upf1Q9EPU0 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 18.9 ms