Protein–RNA interactions for Protein: Q9D2H5

Trim42, Tripartite motif-containing protein 42, mousemouse

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim42Q9D2H5 AC140264.2-202ENSMUST00000218746 817 ntBASIC16.97■□□□□ 0.31
Trim42Q9D2H5 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trim42Q9D2H5 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC16.97■□□□□ 0.31
Trim42Q9D2H5 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
Trim42Q9D2H5 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Trim42Q9D2H5 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trim42Q9D2H5 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC16.97■□□□□ 0.31
Trim42Q9D2H5 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trim42Q9D2H5 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trim42Q9D2H5 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trim42Q9D2H5 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Trim42Q9D2H5 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC16.96■□□□□ 0.31
Trim42Q9D2H5 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trim42Q9D2H5 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trim42Q9D2H5 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
Trim42Q9D2H5 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trim42Q9D2H5 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trim42Q9D2H5 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trim42Q9D2H5 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC16.96■□□□□ 0.31
Trim42Q9D2H5 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Trim42Q9D2H5 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trim42Q9D2H5 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trim42Q9D2H5 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trim42Q9D2H5 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trim42Q9D2H5 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trim42Q9D2H5 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
Trim42Q9D2H5 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
Trim42Q9D2H5 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC16.96■□□□□ 0.31
Trim42Q9D2H5 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.3
Trim42Q9D2H5 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Trim42Q9D2H5 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trim42Q9D2H5 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC16.95■□□□□ 0.3
Trim42Q9D2H5 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trim42Q9D2H5 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trim42Q9D2H5 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trim42Q9D2H5 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Trim42Q9D2H5 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Trim42Q9D2H5 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trim42Q9D2H5 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
Trim42Q9D2H5 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trim42Q9D2H5 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Trim42Q9D2H5 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trim42Q9D2H5 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Trim42Q9D2H5 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC16.95■□□□□ 0.3
Trim42Q9D2H5 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Trim42Q9D2H5 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trim42Q9D2H5 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
Trim42Q9D2H5 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC16.95■□□□□ 0.3
Trim42Q9D2H5 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trim42Q9D2H5 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trim42Q9D2H5 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trim42Q9D2H5 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trim42Q9D2H5 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Trim42Q9D2H5 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC16.95■□□□□ 0.3
Trim42Q9D2H5 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trim42Q9D2H5 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trim42Q9D2H5 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC16.94■□□□□ 0.3
Trim42Q9D2H5 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trim42Q9D2H5 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trim42Q9D2H5 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trim42Q9D2H5 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trim42Q9D2H5 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trim42Q9D2H5 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Trim42Q9D2H5 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trim42Q9D2H5 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Trim42Q9D2H5 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trim42Q9D2H5 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC16.94■□□□□ 0.3
Trim42Q9D2H5 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trim42Q9D2H5 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trim42Q9D2H5 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trim42Q9D2H5 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Trim42Q9D2H5 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trim42Q9D2H5 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trim42Q9D2H5 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trim42Q9D2H5 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trim42Q9D2H5 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trim42Q9D2H5 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trim42Q9D2H5 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trim42Q9D2H5 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trim42Q9D2H5 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trim42Q9D2H5 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trim42Q9D2H5 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trim42Q9D2H5 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trim42Q9D2H5 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trim42Q9D2H5 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Trim42Q9D2H5 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC16.93■□□□□ 0.3
Trim42Q9D2H5 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC16.93■□□□□ 0.3
Trim42Q9D2H5 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trim42Q9D2H5 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trim42Q9D2H5 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trim42Q9D2H5 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trim42Q9D2H5 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Trim42Q9D2H5 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trim42Q9D2H5 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trim42Q9D2H5 Gm13509-201ENSMUST00000119733 1308 ntBASIC16.93■□□□□ 0.3
Trim42Q9D2H5 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trim42Q9D2H5 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trim42Q9D2H5 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Trim42Q9D2H5 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trim42Q9D2H5 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC16.92■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 21 ms