Protein–RNA interactions for Protein: Q9D1C8

Vps28, Vacuolar protein sorting-associated protein 28 homolog, mousemouse

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps28Q9D1C8 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC17.39■□□□□ 0.37
Vps28Q9D1C8 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
Vps28Q9D1C8 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Vps28Q9D1C8 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Vps28Q9D1C8 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Vps28Q9D1C8 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
Vps28Q9D1C8 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Vps28Q9D1C8 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Vps28Q9D1C8 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Vps28Q9D1C8 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Vps28Q9D1C8 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Vps28Q9D1C8 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Vps28Q9D1C8 Gm43338-201ENSMUST00000198617 2223 ntBASIC17.38■□□□□ 0.37
Vps28Q9D1C8 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC17.38■□□□□ 0.37
Vps28Q9D1C8 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Vps28Q9D1C8 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC17.38■□□□□ 0.37
Vps28Q9D1C8 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Vps28Q9D1C8 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Vps28Q9D1C8 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Vps28Q9D1C8 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Vps28Q9D1C8 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Vps28Q9D1C8 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Vps28Q9D1C8 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Vps28Q9D1C8 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Vps28Q9D1C8 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Vps28Q9D1C8 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Vps28Q9D1C8 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Vps28Q9D1C8 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Vps28Q9D1C8 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC17.37■□□□□ 0.37
Vps28Q9D1C8 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC17.37■□□□□ 0.37
Vps28Q9D1C8 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Vps28Q9D1C8 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Vps28Q9D1C8 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Vps28Q9D1C8 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Vps28Q9D1C8 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Vps28Q9D1C8 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC17.37■□□□□ 0.37
Vps28Q9D1C8 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Vps28Q9D1C8 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Vps28Q9D1C8 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Vps28Q9D1C8 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Vps28Q9D1C8 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Vps28Q9D1C8 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Vps28Q9D1C8 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Vps28Q9D1C8 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Vps28Q9D1C8 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Vps28Q9D1C8 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Vps28Q9D1C8 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Vps28Q9D1C8 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
Vps28Q9D1C8 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Vps28Q9D1C8 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC17.36■□□□□ 0.37
Vps28Q9D1C8 Gm18958-201ENSMUST00000174258 762 ntBASIC17.36■□□□□ 0.37
Vps28Q9D1C8 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Vps28Q9D1C8 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Vps28Q9D1C8 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Vps28Q9D1C8 Gm7370-201ENSMUST00000219471 767 ntBASIC17.36■□□□□ 0.37
Vps28Q9D1C8 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Vps28Q9D1C8 Gm15743-202ENSMUST00000182690 1901 ntBASIC17.36■□□□□ 0.37
Vps28Q9D1C8 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC17.36■□□□□ 0.37
Vps28Q9D1C8 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Vps28Q9D1C8 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC17.36■□□□□ 0.37
Vps28Q9D1C8 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC17.36■□□□□ 0.37
Vps28Q9D1C8 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Vps28Q9D1C8 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Vps28Q9D1C8 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Vps28Q9D1C8 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Vps28Q9D1C8 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Vps28Q9D1C8 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Vps28Q9D1C8 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Vps28Q9D1C8 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC17.35■□□□□ 0.37
Vps28Q9D1C8 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Vps28Q9D1C8 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Vps28Q9D1C8 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Vps28Q9D1C8 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Vps28Q9D1C8 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC17.35■□□□□ 0.37
Vps28Q9D1C8 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Vps28Q9D1C8 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Vps28Q9D1C8 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Vps28Q9D1C8 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Vps28Q9D1C8 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
Vps28Q9D1C8 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Vps28Q9D1C8 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Vps28Q9D1C8 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Vps28Q9D1C8 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Vps28Q9D1C8 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Vps28Q9D1C8 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC17.34■□□□□ 0.37
Vps28Q9D1C8 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC17.34■□□□□ 0.37
Vps28Q9D1C8 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Vps28Q9D1C8 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC17.34■□□□□ 0.37
Vps28Q9D1C8 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC17.34■□□□□ 0.37
Vps28Q9D1C8 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Vps28Q9D1C8 AC134329.2-201ENSMUST00000217897 428 ntBASIC17.34■□□□□ 0.37
Vps28Q9D1C8 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Vps28Q9D1C8 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC17.34■□□□□ 0.37
Vps28Q9D1C8 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Vps28Q9D1C8 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
Vps28Q9D1C8 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Vps28Q9D1C8 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
Vps28Q9D1C8 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.37
Vps28Q9D1C8 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC17.33■□□□□ 0.37
Vps28Q9D1C8 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 16.1 ms