Protein–RNA interactions for Protein: Q9CR29

Ccdc43, Coiled-coil domain-containing protein 43, mousemouse

Known RBP Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc43Q9CR29 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
Ccdc43Q9CR29 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ccdc43Q9CR29 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC18.87■□□□□ 0.61
Ccdc43Q9CR29 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ccdc43Q9CR29 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Ccdc43Q9CR29 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ccdc43Q9CR29 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Ccdc43Q9CR29 Gm10517-202ENSMUST00000192970 758 ntBASIC18.87■□□□□ 0.61
Ccdc43Q9CR29 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC18.87■□□□□ 0.61
Ccdc43Q9CR29 Gm4974-201ENSMUST00000209974 875 ntBASIC18.87■□□□□ 0.61
Ccdc43Q9CR29 AC124581.1-201ENSMUST00000225416 1399 ntBASIC18.87■□□□□ 0.61
Ccdc43Q9CR29 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ccdc43Q9CR29 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ccdc43Q9CR29 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Ccdc43Q9CR29 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ccdc43Q9CR29 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ccdc43Q9CR29 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Ccdc43Q9CR29 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ccdc43Q9CR29 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ccdc43Q9CR29 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ccdc43Q9CR29 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
Ccdc43Q9CR29 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ccdc43Q9CR29 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ccdc43Q9CR29 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ccdc43Q9CR29 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC18.86■□□□□ 0.61
Ccdc43Q9CR29 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ccdc43Q9CR29 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Ccdc43Q9CR29 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC18.86■□□□□ 0.61
Ccdc43Q9CR29 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Ccdc43Q9CR29 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ccdc43Q9CR29 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Ccdc43Q9CR29 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ccdc43Q9CR29 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Ccdc43Q9CR29 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Ccdc43Q9CR29 Gm10698-201ENSMUST00000182663 604 ntBASIC18.86■□□□□ 0.61
Ccdc43Q9CR29 Gm8520-201ENSMUST00000186517 868 ntBASIC18.86■□□□□ 0.61
Ccdc43Q9CR29 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ccdc43Q9CR29 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ccdc43Q9CR29 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ccdc43Q9CR29 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ccdc43Q9CR29 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ccdc43Q9CR29 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ccdc43Q9CR29 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ccdc43Q9CR29 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ccdc43Q9CR29 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Ccdc43Q9CR29 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ccdc43Q9CR29 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Ccdc43Q9CR29 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Ccdc43Q9CR29 Gm9694-201ENSMUST00000193347 1189 ntBASIC18.85■□□□□ 0.61
Ccdc43Q9CR29 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ccdc43Q9CR29 Spcs1-207ENSMUST00000228767 1008 ntBASIC18.85■□□□□ 0.61
Ccdc43Q9CR29 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
Ccdc43Q9CR29 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ccdc43Q9CR29 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ccdc43Q9CR29 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ccdc43Q9CR29 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Ccdc43Q9CR29 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ccdc43Q9CR29 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ccdc43Q9CR29 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Ccdc43Q9CR29 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC18.84■□□□□ 0.61
Ccdc43Q9CR29 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC18.84■□□□□ 0.61
Ccdc43Q9CR29 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Ccdc43Q9CR29 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Ccdc43Q9CR29 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ccdc43Q9CR29 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Ccdc43Q9CR29 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ccdc43Q9CR29 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ccdc43Q9CR29 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ccdc43Q9CR29 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Ccdc43Q9CR29 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC18.83■□□□□ 0.61
Ccdc43Q9CR29 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Ccdc43Q9CR29 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
Ccdc43Q9CR29 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Ccdc43Q9CR29 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Ccdc43Q9CR29 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
Ccdc43Q9CR29 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Ccdc43Q9CR29 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC18.83■□□□□ 0.6
Ccdc43Q9CR29 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Ccdc43Q9CR29 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Ccdc43Q9CR29 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Ccdc43Q9CR29 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Ccdc43Q9CR29 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Ccdc43Q9CR29 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Ccdc43Q9CR29 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ccdc43Q9CR29 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ccdc43Q9CR29 CT010444.2-201ENSMUST00000217877 1629 ntBASIC18.82■□□□□ 0.6
Ccdc43Q9CR29 Gm27011-201ENSMUST00000182352 972 ntBASIC18.82■□□□□ 0.6
Ccdc43Q9CR29 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ccdc43Q9CR29 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ccdc43Q9CR29 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ccdc43Q9CR29 Gm19721-201ENSMUST00000195284 1764 ntBASIC18.82■□□□□ 0.6
Ccdc43Q9CR29 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ccdc43Q9CR29 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Ccdc43Q9CR29 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ccdc43Q9CR29 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Ccdc43Q9CR29 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Ccdc43Q9CR29 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ccdc43Q9CR29 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ccdc43Q9CR29 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC18.82■□□□□ 0.6
Ccdc43Q9CR29 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC18.82■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms