Protein–RNA interactions for Protein: Q9CQA6

Chchd1, Coiled-coil-helix-coiled-coil-helix domain-containing protein 1, mousemouse

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chchd1Q9CQA6 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Chchd1Q9CQA6 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Chchd1Q9CQA6 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Chchd1Q9CQA6 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Chchd1Q9CQA6 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Chchd1Q9CQA6 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Chchd1Q9CQA6 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC12.88□□□□□ -0.35
Chchd1Q9CQA6 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Chchd1Q9CQA6 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Chchd1Q9CQA6 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Chchd1Q9CQA6 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Chchd1Q9CQA6 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC12.88□□□□□ -0.35
Chchd1Q9CQA6 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Chchd1Q9CQA6 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Chchd1Q9CQA6 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Chchd1Q9CQA6 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Chchd1Q9CQA6 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Chchd1Q9CQA6 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Chchd1Q9CQA6 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Chchd1Q9CQA6 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Chchd1Q9CQA6 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Chchd1Q9CQA6 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Chchd1Q9CQA6 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Chchd1Q9CQA6 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Chchd1Q9CQA6 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Chchd1Q9CQA6 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Chchd1Q9CQA6 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Chchd1Q9CQA6 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Chchd1Q9CQA6 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Chchd1Q9CQA6 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Chchd1Q9CQA6 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Chchd1Q9CQA6 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Chchd1Q9CQA6 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Chchd1Q9CQA6 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Chchd1Q9CQA6 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC12.87□□□□□ -0.35
Chchd1Q9CQA6 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Chchd1Q9CQA6 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Chchd1Q9CQA6 Gm43072-201ENSMUST00000200283 1671 ntBASIC12.87□□□□□ -0.35
Chchd1Q9CQA6 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Chchd1Q9CQA6 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC12.87□□□□□ -0.35
Chchd1Q9CQA6 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC12.87□□□□□ -0.35
Chchd1Q9CQA6 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC12.87□□□□□ -0.35
Chchd1Q9CQA6 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Chchd1Q9CQA6 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Chchd1Q9CQA6 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Chchd1Q9CQA6 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Chchd1Q9CQA6 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Chchd1Q9CQA6 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Chchd1Q9CQA6 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Chchd1Q9CQA6 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Chchd1Q9CQA6 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Chchd1Q9CQA6 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Chchd1Q9CQA6 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Chchd1Q9CQA6 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Chchd1Q9CQA6 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Chchd1Q9CQA6 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Chchd1Q9CQA6 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Chchd1Q9CQA6 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Chchd1Q9CQA6 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Chchd1Q9CQA6 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Chchd1Q9CQA6 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Chchd1Q9CQA6 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Chchd1Q9CQA6 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC12.86□□□□□ -0.35
Chchd1Q9CQA6 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Chchd1Q9CQA6 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Chchd1Q9CQA6 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Chchd1Q9CQA6 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC12.86□□□□□ -0.35
Chchd1Q9CQA6 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Chchd1Q9CQA6 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
Chchd1Q9CQA6 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Chchd1Q9CQA6 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Chchd1Q9CQA6 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Chchd1Q9CQA6 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Chchd1Q9CQA6 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Chchd1Q9CQA6 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC12.86□□□□□ -0.35
Chchd1Q9CQA6 Gm5067-201ENSMUST00000170449 1009 ntBASIC12.86□□□□□ -0.35
Chchd1Q9CQA6 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC12.86□□□□□ -0.35
Chchd1Q9CQA6 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Chchd1Q9CQA6 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Chchd1Q9CQA6 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Chchd1Q9CQA6 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Chchd1Q9CQA6 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Chchd1Q9CQA6 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Chchd1Q9CQA6 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Chchd1Q9CQA6 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC12.86□□□□□ -0.35
Chchd1Q9CQA6 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Chchd1Q9CQA6 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Chchd1Q9CQA6 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Chchd1Q9CQA6 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Chchd1Q9CQA6 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Chchd1Q9CQA6 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Chchd1Q9CQA6 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Chchd1Q9CQA6 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC12.86□□□□□ -0.35
Chchd1Q9CQA6 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Chchd1Q9CQA6 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Chchd1Q9CQA6 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Chchd1Q9CQA6 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Chchd1Q9CQA6 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC12.86□□□□□ -0.35
Chchd1Q9CQA6 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Chchd1Q9CQA6 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms