Protein–RNA interactions for Protein: Q99PQ2

Trim11, E3 ubiquitin-protein ligase TRIM11, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11Q99PQ2 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Trim11Q99PQ2 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC19.3■□□□□ 0.68
Trim11Q99PQ2 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trim11Q99PQ2 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trim11Q99PQ2 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trim11Q99PQ2 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC19.3■□□□□ 0.68
Trim11Q99PQ2 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trim11Q99PQ2 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trim11Q99PQ2 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trim11Q99PQ2 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trim11Q99PQ2 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trim11Q99PQ2 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trim11Q99PQ2 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC19.29■□□□□ 0.68
Trim11Q99PQ2 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trim11Q99PQ2 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC19.29■□□□□ 0.68
Trim11Q99PQ2 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trim11Q99PQ2 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC19.29■□□□□ 0.68
Trim11Q99PQ2 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trim11Q99PQ2 Gm13216-201ENSMUST00000117145 591 ntBASIC19.29■□□□□ 0.68
Trim11Q99PQ2 Gm7638-201ENSMUST00000121348 967 ntBASIC19.29■□□□□ 0.68
Trim11Q99PQ2 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trim11Q99PQ2 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Trim11Q99PQ2 Gm16042-201ENSMUST00000204813 1247 ntBASIC19.29■□□□□ 0.68
Trim11Q99PQ2 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Trim11Q99PQ2 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trim11Q99PQ2 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trim11Q99PQ2 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trim11Q99PQ2 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Trim11Q99PQ2 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trim11Q99PQ2 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Trim11Q99PQ2 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trim11Q99PQ2 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Trim11Q99PQ2 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trim11Q99PQ2 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Trim11Q99PQ2 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trim11Q99PQ2 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trim11Q99PQ2 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trim11Q99PQ2 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Trim11Q99PQ2 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Trim11Q99PQ2 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC19.28■□□□□ 0.68
Trim11Q99PQ2 Timm23-208ENSMUST00000226683 750 ntBASIC19.28■□□□□ 0.68
Trim11Q99PQ2 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Trim11Q99PQ2 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trim11Q99PQ2 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC19.28■□□□□ 0.68
Trim11Q99PQ2 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC19.28■□□□□ 0.68
Trim11Q99PQ2 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trim11Q99PQ2 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trim11Q99PQ2 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trim11Q99PQ2 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trim11Q99PQ2 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Trim11Q99PQ2 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trim11Q99PQ2 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Trim11Q99PQ2 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Trim11Q99PQ2 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC19.27■□□□□ 0.68
Trim11Q99PQ2 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Trim11Q99PQ2 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Trim11Q99PQ2 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Trim11Q99PQ2 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Trim11Q99PQ2 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Trim11Q99PQ2 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC19.27■□□□□ 0.68
Trim11Q99PQ2 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Trim11Q99PQ2 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Trim11Q99PQ2 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC19.27■□□□□ 0.68
Trim11Q99PQ2 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Trim11Q99PQ2 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Trim11Q99PQ2 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Trim11Q99PQ2 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Trim11Q99PQ2 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Trim11Q99PQ2 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.67
Trim11Q99PQ2 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Trim11Q99PQ2 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.67
Trim11Q99PQ2 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
Trim11Q99PQ2 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Trim11Q99PQ2 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trim11Q99PQ2 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trim11Q99PQ2 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trim11Q99PQ2 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trim11Q99PQ2 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trim11Q99PQ2 Gm15743-202ENSMUST00000182690 1901 ntBASIC19.26■□□□□ 0.67
Trim11Q99PQ2 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trim11Q99PQ2 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trim11Q99PQ2 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trim11Q99PQ2 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC19.26■□□□□ 0.67
Trim11Q99PQ2 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC19.26■□□□□ 0.67
Trim11Q99PQ2 Il3ra-202ENSMUST00000223589 738 ntBASIC19.26■□□□□ 0.67
Trim11Q99PQ2 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Trim11Q99PQ2 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Trim11Q99PQ2 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC19.26■□□□□ 0.67
Trim11Q99PQ2 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trim11Q99PQ2 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC19.26■□□□□ 0.67
Trim11Q99PQ2 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trim11Q99PQ2 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trim11Q99PQ2 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Trim11Q99PQ2 Haglr-201ENSMUST00000100000 2085 ntBASIC19.26■□□□□ 0.67
Trim11Q99PQ2 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trim11Q99PQ2 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trim11Q99PQ2 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trim11Q99PQ2 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Trim11Q99PQ2 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trim11Q99PQ2 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 19.5 ms