Protein–RNA interactions for Protein: Q99NH8

Trem2, Triggering receptor expressed on myeloid cells 2, mousemouse

Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trem2Q99NH8 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trem2Q99NH8 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Trem2Q99NH8 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trem2Q99NH8 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC17.24■□□□□ 0.35
Trem2Q99NH8 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trem2Q99NH8 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trem2Q99NH8 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trem2Q99NH8 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trem2Q99NH8 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Trem2Q99NH8 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trem2Q99NH8 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trem2Q99NH8 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trem2Q99NH8 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trem2Q99NH8 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trem2Q99NH8 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trem2Q99NH8 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Trem2Q99NH8 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC17.23■□□□□ 0.35
Trem2Q99NH8 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trem2Q99NH8 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trem2Q99NH8 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Trem2Q99NH8 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trem2Q99NH8 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC17.23■□□□□ 0.35
Trem2Q99NH8 Arhgef33-211ENSMUST00000225658 473 ntBASIC17.23■□□□□ 0.35
Trem2Q99NH8 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trem2Q99NH8 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC17.23■□□□□ 0.35
Trem2Q99NH8 Gm9954-202ENSMUST00000198686 4725 ntBASIC17.23■□□□□ 0.35
Trem2Q99NH8 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trem2Q99NH8 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Trem2Q99NH8 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Trem2Q99NH8 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Trem2Q99NH8 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trem2Q99NH8 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trem2Q99NH8 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trem2Q99NH8 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trem2Q99NH8 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trem2Q99NH8 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trem2Q99NH8 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trem2Q99NH8 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trem2Q99NH8 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trem2Q99NH8 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trem2Q99NH8 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trem2Q99NH8 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Trem2Q99NH8 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trem2Q99NH8 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC17.22■□□□□ 0.35
Trem2Q99NH8 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trem2Q99NH8 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Trem2Q99NH8 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Trem2Q99NH8 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trem2Q99NH8 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Trem2Q99NH8 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC17.22■□□□□ 0.35
Trem2Q99NH8 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trem2Q99NH8 Gm27463-201ENSMUST00000183569 57 ntBASIC17.22■□□□□ 0.35
Trem2Q99NH8 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC17.22■□□□□ 0.35
Trem2Q99NH8 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC17.22■□□□□ 0.35
Trem2Q99NH8 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
Trem2Q99NH8 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trem2Q99NH8 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trem2Q99NH8 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Trem2Q99NH8 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trem2Q99NH8 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Trem2Q99NH8 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trem2Q99NH8 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Trem2Q99NH8 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Trem2Q99NH8 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC17.22■□□□□ 0.35
Trem2Q99NH8 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trem2Q99NH8 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Trem2Q99NH8 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trem2Q99NH8 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Trem2Q99NH8 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trem2Q99NH8 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Trem2Q99NH8 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Trem2Q99NH8 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trem2Q99NH8 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trem2Q99NH8 Gm37166-201ENSMUST00000195473 2474 ntBASIC17.21■□□□□ 0.35
Trem2Q99NH8 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
Trem2Q99NH8 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Trem2Q99NH8 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC17.21■□□□□ 0.35
Trem2Q99NH8 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC17.21■□□□□ 0.35
Trem2Q99NH8 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Trem2Q99NH8 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Trem2Q99NH8 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trem2Q99NH8 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trem2Q99NH8 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Trem2Q99NH8 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trem2Q99NH8 Gm26596-201ENSMUST00000180464 2655 ntBASIC17.21■□□□□ 0.35
Trem2Q99NH8 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC17.21■□□□□ 0.34
Trem2Q99NH8 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trem2Q99NH8 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trem2Q99NH8 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Trem2Q99NH8 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
Trem2Q99NH8 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC17.2■□□□□ 0.34
Trem2Q99NH8 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trem2Q99NH8 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Trem2Q99NH8 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
Trem2Q99NH8 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trem2Q99NH8 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Trem2Q99NH8 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC17.2■□□□□ 0.34
Trem2Q99NH8 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC17.2■□□□□ 0.34
Trem2Q99NH8 Gm43353-201ENSMUST00000199224 1295 ntBASIC17.2■□□□□ 0.34
Trem2Q99NH8 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC17.2■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms