Protein–RNA interactions for Protein: Q99N13

Hdac9, Histone deacetylase 9, mousemouse

Predictions only

Length 588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac9Q99N13 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC19.94■□□□□ 0.78
Hdac9Q99N13 AC159301.1-201ENSMUST00000225130 1182 ntBASIC19.94■□□□□ 0.78
Hdac9Q99N13 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Hdac9Q99N13 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Hdac9Q99N13 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
Hdac9Q99N13 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Hdac9Q99N13 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
Hdac9Q99N13 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Hdac9Q99N13 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Hdac9Q99N13 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Hdac9Q99N13 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Hdac9Q99N13 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Hdac9Q99N13 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC19.93■□□□□ 0.78
Hdac9Q99N13 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC19.93■□□□□ 0.78
Hdac9Q99N13 Gm18733-201ENSMUST00000173950 856 ntBASIC19.93■□□□□ 0.78
Hdac9Q99N13 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Hdac9Q99N13 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Hdac9Q99N13 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Hdac9Q99N13 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Hdac9Q99N13 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Hdac9Q99N13 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Hdac9Q99N13 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Hdac9Q99N13 Gm7935-201ENSMUST00000100555 1278 ntBASIC19.92■□□□□ 0.78
Hdac9Q99N13 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC19.92■□□□□ 0.78
Hdac9Q99N13 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Hdac9Q99N13 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC19.92■□□□□ 0.78
Hdac9Q99N13 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC19.92■□□□□ 0.78
Hdac9Q99N13 Gm29707-201ENSMUST00000196325 491 ntBASIC19.92■□□□□ 0.78
Hdac9Q99N13 AC108846.1-201ENSMUST00000214531 513 ntBASIC19.92■□□□□ 0.78
Hdac9Q99N13 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Hdac9Q99N13 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Hdac9Q99N13 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC19.92■□□□□ 0.78
Hdac9Q99N13 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Hdac9Q99N13 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Hdac9Q99N13 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Hdac9Q99N13 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
Hdac9Q99N13 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Hdac9Q99N13 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Hdac9Q99N13 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Hdac9Q99N13 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Hdac9Q99N13 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Hdac9Q99N13 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Hdac9Q99N13 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC19.91■□□□□ 0.78
Hdac9Q99N13 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC19.91■□□□□ 0.78
Hdac9Q99N13 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Hdac9Q99N13 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
Hdac9Q99N13 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Hdac9Q99N13 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC19.91■□□□□ 0.78
Hdac9Q99N13 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Hdac9Q99N13 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Hdac9Q99N13 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
Hdac9Q99N13 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Hdac9Q99N13 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Hdac9Q99N13 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Hdac9Q99N13 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
Hdac9Q99N13 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC19.9■□□□□ 0.78
Hdac9Q99N13 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Hdac9Q99N13 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Hdac9Q99N13 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Hdac9Q99N13 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Hdac9Q99N13 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Hdac9Q99N13 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Hdac9Q99N13 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Hdac9Q99N13 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Hdac9Q99N13 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Hdac9Q99N13 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Hdac9Q99N13 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Hdac9Q99N13 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
Hdac9Q99N13 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
Hdac9Q99N13 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Hdac9Q99N13 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC19.89■□□□□ 0.77
Hdac9Q99N13 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Hdac9Q99N13 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
Hdac9Q99N13 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC19.89■□□□□ 0.77
Hdac9Q99N13 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC19.89■□□□□ 0.77
Hdac9Q99N13 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Hdac9Q99N13 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Hdac9Q99N13 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
Hdac9Q99N13 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Hdac9Q99N13 Gm44450-201ENSMUST00000199528 114 ntBASIC19.89■□□□□ 0.77
Hdac9Q99N13 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC19.89■□□□□ 0.77
Hdac9Q99N13 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Hdac9Q99N13 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC19.89■□□□□ 0.77
Hdac9Q99N13 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Hdac9Q99N13 Grk6-206ENSMUST00000224995 2971 ntBASIC19.89■□□□□ 0.77
Hdac9Q99N13 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Hdac9Q99N13 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Hdac9Q99N13 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Hdac9Q99N13 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC19.88■□□□□ 0.77
Hdac9Q99N13 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
Hdac9Q99N13 Gm12644-201ENSMUST00000119935 606 ntBASIC19.88■□□□□ 0.77
Hdac9Q99N13 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Hdac9Q99N13 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC19.88■□□□□ 0.77
Hdac9Q99N13 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Hdac9Q99N13 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Hdac9Q99N13 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Hdac9Q99N13 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC19.88■□□□□ 0.77
Hdac9Q99N13 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC19.88■□□□□ 0.77
Hdac9Q99N13 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Hdac9Q99N13 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 52.5 ms