Protein–RNA interactions for Protein: Q99LI2

Clcc1, Chloride channel CLIC-like protein 1, mousemouse

Predictions only

Length 539 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcc1Q99LI2 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Clcc1Q99LI2 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Clcc1Q99LI2 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Clcc1Q99LI2 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC16.76■□□□□ 0.27
Clcc1Q99LI2 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Clcc1Q99LI2 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Clcc1Q99LI2 Gm18958-201ENSMUST00000174258 762 ntBASIC16.76■□□□□ 0.27
Clcc1Q99LI2 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Clcc1Q99LI2 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Clcc1Q99LI2 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Clcc1Q99LI2 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC16.76■□□□□ 0.27
Clcc1Q99LI2 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Clcc1Q99LI2 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Clcc1Q99LI2 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Clcc1Q99LI2 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Clcc1Q99LI2 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Clcc1Q99LI2 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Clcc1Q99LI2 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Clcc1Q99LI2 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Clcc1Q99LI2 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Clcc1Q99LI2 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC16.75■□□□□ 0.27
Clcc1Q99LI2 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Clcc1Q99LI2 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Clcc1Q99LI2 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Clcc1Q99LI2 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC16.75■□□□□ 0.27
Clcc1Q99LI2 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Clcc1Q99LI2 AC154471.1-201ENSMUST00000224418 436 ntBASIC16.75■□□□□ 0.27
Clcc1Q99LI2 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Clcc1Q99LI2 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Clcc1Q99LI2 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Clcc1Q99LI2 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Clcc1Q99LI2 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Clcc1Q99LI2 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Clcc1Q99LI2 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Clcc1Q99LI2 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Clcc1Q99LI2 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Clcc1Q99LI2 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Clcc1Q99LI2 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC16.74■□□□□ 0.27
Clcc1Q99LI2 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Clcc1Q99LI2 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC16.74■□□□□ 0.27
Clcc1Q99LI2 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Clcc1Q99LI2 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Clcc1Q99LI2 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Clcc1Q99LI2 Gm5587-201ENSMUST00000206270 674 ntBASIC16.74■□□□□ 0.27
Clcc1Q99LI2 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
Clcc1Q99LI2 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Clcc1Q99LI2 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Clcc1Q99LI2 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Clcc1Q99LI2 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC16.74■□□□□ 0.27
Clcc1Q99LI2 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Clcc1Q99LI2 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC16.73■□□□□ 0.27
Clcc1Q99LI2 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Clcc1Q99LI2 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Clcc1Q99LI2 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Clcc1Q99LI2 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Clcc1Q99LI2 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Clcc1Q99LI2 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Clcc1Q99LI2 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Clcc1Q99LI2 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Clcc1Q99LI2 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Clcc1Q99LI2 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Clcc1Q99LI2 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Clcc1Q99LI2 Gm26039-201ENSMUST00000158152 144 ntBASIC16.73■□□□□ 0.27
Clcc1Q99LI2 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Clcc1Q99LI2 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC16.73■□□□□ 0.27
Clcc1Q99LI2 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Clcc1Q99LI2 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC16.73■□□□□ 0.27
Clcc1Q99LI2 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Clcc1Q99LI2 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Clcc1Q99LI2 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC16.73■□□□□ 0.27
Clcc1Q99LI2 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Clcc1Q99LI2 Gm6598-201ENSMUST00000202719 2615 ntBASIC16.73■□□□□ 0.27
Clcc1Q99LI2 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Clcc1Q99LI2 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Clcc1Q99LI2 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Clcc1Q99LI2 Gm5898-201ENSMUST00000121016 2071 ntBASIC16.73■□□□□ 0.27
Clcc1Q99LI2 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Clcc1Q99LI2 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Clcc1Q99LI2 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Clcc1Q99LI2 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
Clcc1Q99LI2 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Clcc1Q99LI2 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Clcc1Q99LI2 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC16.72■□□□□ 0.27
Clcc1Q99LI2 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Clcc1Q99LI2 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Clcc1Q99LI2 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Clcc1Q99LI2 Ank2-226ENSMUST00000189368 339 ntBASIC16.72■□□□□ 0.27
Clcc1Q99LI2 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Clcc1Q99LI2 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Clcc1Q99LI2 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Clcc1Q99LI2 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Clcc1Q99LI2 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Clcc1Q99LI2 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Clcc1Q99LI2 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Clcc1Q99LI2 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Clcc1Q99LI2 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Clcc1Q99LI2 AC125311.2-201ENSMUST00000227477 1940 ntBASIC16.72■□□□□ 0.27
Clcc1Q99LI2 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Clcc1Q99LI2 Gm37519-201ENSMUST00000191687 2210 ntBASIC16.72■□□□□ 0.27
Clcc1Q99LI2 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 39.9 ms