Protein–RNA interactions for Protein: Q99J95

Cdk9, Cyclin-dependent kinase 9, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk9Q99J95 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Cdk9Q99J95 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cdk9Q99J95 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cdk9Q99J95 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cdk9Q99J95 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC17.11■□□□□ 0.33
Cdk9Q99J95 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC17.11■□□□□ 0.33
Cdk9Q99J95 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC17.11■□□□□ 0.33
Cdk9Q99J95 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Cdk9Q99J95 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cdk9Q99J95 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cdk9Q99J95 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cdk9Q99J95 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cdk9Q99J95 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cdk9Q99J95 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cdk9Q99J95 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Cdk9Q99J95 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cdk9Q99J95 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cdk9Q99J95 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cdk9Q99J95 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cdk9Q99J95 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Cdk9Q99J95 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cdk9Q99J95 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cdk9Q99J95 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cdk9Q99J95 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cdk9Q99J95 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cdk9Q99J95 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Cdk9Q99J95 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
Cdk9Q99J95 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cdk9Q99J95 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cdk9Q99J95 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cdk9Q99J95 AC108858.1-201ENSMUST00000228461 1498 ntBASIC17.1■□□□□ 0.33
Cdk9Q99J95 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cdk9Q99J95 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC17.1■□□□□ 0.33
Cdk9Q99J95 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cdk9Q99J95 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC17.1■□□□□ 0.33
Cdk9Q99J95 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Cdk9Q99J95 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cdk9Q99J95 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cdk9Q99J95 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Cdk9Q99J95 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Cdk9Q99J95 Gm10418-201ENSMUST00000100943 576 ntBASIC17.09■□□□□ 0.33
Cdk9Q99J95 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cdk9Q99J95 Gm12933-201ENSMUST00000120203 872 ntBASIC17.09■□□□□ 0.33
Cdk9Q99J95 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
Cdk9Q99J95 Gm38285-201ENSMUST00000192928 922 ntBASIC17.09■□□□□ 0.33
Cdk9Q99J95 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC17.09■□□□□ 0.33
Cdk9Q99J95 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Cdk9Q99J95 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cdk9Q99J95 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cdk9Q99J95 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cdk9Q99J95 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cdk9Q99J95 Gm37812-201ENSMUST00000195216 2475 ntBASIC17.08■□□□□ 0.33
Cdk9Q99J95 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Cdk9Q99J95 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Cdk9Q99J95 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Cdk9Q99J95 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cdk9Q99J95 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cdk9Q99J95 Gm13509-201ENSMUST00000119733 1308 ntBASIC17.08■□□□□ 0.32
Cdk9Q99J95 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cdk9Q99J95 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC17.08■□□□□ 0.32
Cdk9Q99J95 AC140264.2-202ENSMUST00000218746 817 ntBASIC17.08■□□□□ 0.32
Cdk9Q99J95 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cdk9Q99J95 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cdk9Q99J95 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Cdk9Q99J95 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cdk9Q99J95 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cdk9Q99J95 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Cdk9Q99J95 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cdk9Q99J95 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cdk9Q99J95 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cdk9Q99J95 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Cdk9Q99J95 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Cdk9Q99J95 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cdk9Q99J95 Gm43272-201ENSMUST00000200599 1584 ntBASIC17.07■□□□□ 0.32
Cdk9Q99J95 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Cdk9Q99J95 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Cdk9Q99J95 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC17.07■□□□□ 0.32
Cdk9Q99J95 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Cdk9Q99J95 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cdk9Q99J95 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cdk9Q99J95 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC17.07■□□□□ 0.32
Cdk9Q99J95 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cdk9Q99J95 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cdk9Q99J95 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Cdk9Q99J95 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cdk9Q99J95 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cdk9Q99J95 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cdk9Q99J95 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cdk9Q99J95 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC17.07■□□□□ 0.32
Cdk9Q99J95 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Cdk9Q99J95 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC17.07■□□□□ 0.32
Cdk9Q99J95 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cdk9Q99J95 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cdk9Q99J95 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cdk9Q99J95 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cdk9Q99J95 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cdk9Q99J95 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Cdk9Q99J95 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cdk9Q99J95 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Cdk9Q99J95 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms