Protein–RNA interactions for Protein: Q91Y11

Pcdha9, Protocadherin alpha-9, mousemouse

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha9Q91Y11 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
Pcdha9Q91Y11 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdha9Q91Y11 Gm29994-201ENSMUST00000195495 1193 ntBASIC18.03■□□□□ 0.48
Pcdha9Q91Y11 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC18.03■□□□□ 0.48
Pcdha9Q91Y11 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdha9Q91Y11 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdha9Q91Y11 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdha9Q91Y11 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdha9Q91Y11 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdha9Q91Y11 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC18.03■□□□□ 0.48
Pcdha9Q91Y11 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Pcdha9Q91Y11 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
Pcdha9Q91Y11 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
Pcdha9Q91Y11 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Pcdha9Q91Y11 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Pcdha9Q91Y11 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Pcdha9Q91Y11 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Pcdha9Q91Y11 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Pcdha9Q91Y11 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC18.02■□□□□ 0.48
Pcdha9Q91Y11 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC18.02■□□□□ 0.48
Pcdha9Q91Y11 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Pcdha9Q91Y11 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Pcdha9Q91Y11 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
Pcdha9Q91Y11 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
Pcdha9Q91Y11 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Pcdha9Q91Y11 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
Pcdha9Q91Y11 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.47
Pcdha9Q91Y11 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Pcdha9Q91Y11 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdha9Q91Y11 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdha9Q91Y11 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdha9Q91Y11 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdha9Q91Y11 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
Pcdha9Q91Y11 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdha9Q91Y11 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
Pcdha9Q91Y11 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC18.01■□□□□ 0.47
Pcdha9Q91Y11 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
Pcdha9Q91Y11 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdha9Q91Y11 Gm9987-201ENSMUST00000069768 567 ntBASIC18.01■□□□□ 0.47
Pcdha9Q91Y11 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdha9Q91Y11 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdha9Q91Y11 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
Pcdha9Q91Y11 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
Pcdha9Q91Y11 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdha9Q91Y11 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Pcdha9Q91Y11 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Pcdha9Q91Y11 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
Pcdha9Q91Y11 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Pcdha9Q91Y11 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Pcdha9Q91Y11 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
Pcdha9Q91Y11 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Pcdha9Q91Y11 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
Pcdha9Q91Y11 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
Pcdha9Q91Y11 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC18■□□□□ 0.47
Pcdha9Q91Y11 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
Pcdha9Q91Y11 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC18■□□□□ 0.47
Pcdha9Q91Y11 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Pcdha9Q91Y11 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
Pcdha9Q91Y11 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
Pcdha9Q91Y11 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Pcdha9Q91Y11 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Pcdha9Q91Y11 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Pcdha9Q91Y11 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Pcdha9Q91Y11 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Pcdha9Q91Y11 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
Pcdha9Q91Y11 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Pcdha9Q91Y11 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdha9Q91Y11 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdha9Q91Y11 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdha9Q91Y11 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdha9Q91Y11 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC17.99■□□□□ 0.47
Pcdha9Q91Y11 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdha9Q91Y11 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdha9Q91Y11 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdha9Q91Y11 Gm7213-201ENSMUST00000215977 950 ntBASIC17.99■□□□□ 0.47
Pcdha9Q91Y11 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdha9Q91Y11 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdha9Q91Y11 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdha9Q91Y11 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdha9Q91Y11 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdha9Q91Y11 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdha9Q91Y11 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdha9Q91Y11 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC17.99■□□□□ 0.47
Pcdha9Q91Y11 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdha9Q91Y11 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
Pcdha9Q91Y11 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdha9Q91Y11 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdha9Q91Y11 Gm19439-201ENSMUST00000198195 2273 ntBASIC17.98■□□□□ 0.47
Pcdha9Q91Y11 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdha9Q91Y11 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
Pcdha9Q91Y11 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC17.98■□□□□ 0.47
Pcdha9Q91Y11 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdha9Q91Y11 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdha9Q91Y11 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdha9Q91Y11 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdha9Q91Y11 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC17.98■□□□□ 0.47
Pcdha9Q91Y11 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdha9Q91Y11 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC17.98■□□□□ 0.47
Pcdha9Q91Y11 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdha9Q91Y11 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms