Protein–RNA interactions for Protein: Q91XZ9

Pcdhb20, Protocadherin beta 20, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb20Q91XZ9 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdhb20Q91XZ9 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdhb20Q91XZ9 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdhb20Q91XZ9 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Pcdhb20Q91XZ9 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
Pcdhb20Q91XZ9 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdhb20Q91XZ9 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdhb20Q91XZ9 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdhb20Q91XZ9 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdhb20Q91XZ9 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdhb20Q91XZ9 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdhb20Q91XZ9 2900076G11Rik-201ENSMUST00000202297 631 ntBASIC16.36■□□□□ 0.21
Pcdhb20Q91XZ9 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdhb20Q91XZ9 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdhb20Q91XZ9 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdhb20Q91XZ9 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdhb20Q91XZ9 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdhb20Q91XZ9 Gm8369-201ENSMUST00000079855 1374 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Pcdhb20Q91XZ9 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdhb20Q91XZ9 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdhb20Q91XZ9 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Pcdhb20Q91XZ9 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
Pcdhb20Q91XZ9 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdhb20Q91XZ9 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pcdhb20Q91XZ9 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pcdhb20Q91XZ9 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
Pcdhb20Q91XZ9 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pcdhb20Q91XZ9 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
Pcdhb20Q91XZ9 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Pcdhb20Q91XZ9 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pcdhb20Q91XZ9 Sox5it-201ENSMUST00000144026 1207 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Pcdhb20Q91XZ9 Gm16107-201ENSMUST00000162523 862 ntBASIC16.35■□□□□ 0.21
Pcdhb20Q91XZ9 Mir1668-201ENSMUST00000184114 107 ntBASIC16.35■□□□□ 0.21
Pcdhb20Q91XZ9 Gm19080-201ENSMUST00000196082 550 ntBASIC16.35■□□□□ 0.21
Pcdhb20Q91XZ9 Fcho2-208ENSMUST00000224992 2964 ntBASIC16.35■□□□□ 0.21
Pcdhb20Q91XZ9 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pcdhb20Q91XZ9 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Pcdhb20Q91XZ9 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC16.35■□□□□ 0.21
Pcdhb20Q91XZ9 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
Pcdhb20Q91XZ9 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Pcdhb20Q91XZ9 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
Pcdhb20Q91XZ9 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Pcdhb20Q91XZ9 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC16.35■□□□□ 0.21
Pcdhb20Q91XZ9 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC16.35■□□□□ 0.21
Pcdhb20Q91XZ9 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pcdhb20Q91XZ9 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pcdhb20Q91XZ9 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Pcdhb20Q91XZ9 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pcdhb20Q91XZ9 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pcdhb20Q91XZ9 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Pcdhb20Q91XZ9 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pcdhb20Q91XZ9 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pcdhb20Q91XZ9 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Pcdhb20Q91XZ9 Gm6659-201ENSMUST00000174752 547 ntBASIC16.34■□□□□ 0.21
Pcdhb20Q91XZ9 Gm27389-201ENSMUST00000183622 195 ntBASIC16.34■□□□□ 0.21
Pcdhb20Q91XZ9 Gm7213-201ENSMUST00000215977 950 ntBASIC16.34■□□□□ 0.21
Pcdhb20Q91XZ9 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Pcdhb20Q91XZ9 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pcdhb20Q91XZ9 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pcdhb20Q91XZ9 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Pcdhb20Q91XZ9 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pcdhb20Q91XZ9 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC16.34■□□□□ 0.21
Pcdhb20Q91XZ9 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC16.34■□□□□ 0.21
Pcdhb20Q91XZ9 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pcdhb20Q91XZ9 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Pcdhb20Q91XZ9 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Pcdhb20Q91XZ9 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC16.34■□□□□ 0.21
Pcdhb20Q91XZ9 Zcchc6-207ENSMUST00000225576 2499 ntBASIC16.34■□□□□ 0.21
Pcdhb20Q91XZ9 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pcdhb20Q91XZ9 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
Pcdhb20Q91XZ9 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Pcdhb20Q91XZ9 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC16.33■□□□□ 0.21
Pcdhb20Q91XZ9 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC16.33■□□□□ 0.2
Pcdhb20Q91XZ9 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC16.33■□□□□ 0.2
Pcdhb20Q91XZ9 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC16.33■□□□□ 0.2
Pcdhb20Q91XZ9 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
Pcdhb20Q91XZ9 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Pcdhb20Q91XZ9 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Pcdhb20Q91XZ9 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Pcdhb20Q91XZ9 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
Pcdhb20Q91XZ9 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Pcdhb20Q91XZ9 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Pcdhb20Q91XZ9 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
Pcdhb20Q91XZ9 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Pcdhb20Q91XZ9 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Pcdhb20Q91XZ9 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Pcdhb20Q91XZ9 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Pcdhb20Q91XZ9 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC16.33■□□□□ 0.2
Pcdhb20Q91XZ9 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Pcdhb20Q91XZ9 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdhb20Q91XZ9 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdhb20Q91XZ9 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdhb20Q91XZ9 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdhb20Q91XZ9 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdhb20Q91XZ9 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdhb20Q91XZ9 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC16.32■□□□□ 0.2
Pcdhb20Q91XZ9 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC16.32■□□□□ 0.2
Pcdhb20Q91XZ9 Gm22993-201ENSMUST00000175423 254 ntBASIC16.32■□□□□ 0.2
Pcdhb20Q91XZ9 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdhb20Q91XZ9 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC16.32■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 20 ms