Protein–RNA interactions for Protein: Q91XY4

Pcdhga4, Protocadherin gamma-A4, mousemouse

Predictions only

Length 930 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga4Q91XY4 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Pcdhga4Q91XY4 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC16.7■□□□□ 0.26
Pcdhga4Q91XY4 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Pcdhga4Q91XY4 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhga4Q91XY4 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhga4Q91XY4 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhga4Q91XY4 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdhga4Q91XY4 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdhga4Q91XY4 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdhga4Q91XY4 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdhga4Q91XY4 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdhga4Q91XY4 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdhga4Q91XY4 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdhga4Q91XY4 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC16.69■□□□□ 0.26
Pcdhga4Q91XY4 Gm24841-201ENSMUST00000158676 357 ntBASIC16.69■□□□□ 0.26
Pcdhga4Q91XY4 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdhga4Q91XY4 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdhga4Q91XY4 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdhga4Q91XY4 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdhga4Q91XY4 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Pcdhga4Q91XY4 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdhga4Q91XY4 Gm37820-201ENSMUST00000194021 2147 ntBASIC16.69■□□□□ 0.26
Pcdhga4Q91XY4 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdhga4Q91XY4 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdhga4Q91XY4 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdhga4Q91XY4 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC16.68■□□□□ 0.26
Pcdhga4Q91XY4 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdhga4Q91XY4 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdhga4Q91XY4 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdhga4Q91XY4 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdhga4Q91XY4 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdhga4Q91XY4 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdhga4Q91XY4 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdhga4Q91XY4 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdhga4Q91XY4 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdhga4Q91XY4 Gm37025-201ENSMUST00000195159 829 ntBASIC16.68■□□□□ 0.26
Pcdhga4Q91XY4 Gm43799-201ENSMUST00000201845 579 ntBASIC16.68■□□□□ 0.26
Pcdhga4Q91XY4 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
Pcdhga4Q91XY4 AC153881.2-201ENSMUST00000214877 204 ntBASIC16.68■□□□□ 0.26
Pcdhga4Q91XY4 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdhga4Q91XY4 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
Pcdhga4Q91XY4 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdhga4Q91XY4 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdhga4Q91XY4 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Pcdhga4Q91XY4 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdhga4Q91XY4 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdhga4Q91XY4 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdhga4Q91XY4 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdhga4Q91XY4 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdhga4Q91XY4 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdhga4Q91XY4 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC16.68■□□□□ 0.26
Pcdhga4Q91XY4 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdhga4Q91XY4 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdhga4Q91XY4 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
Pcdhga4Q91XY4 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdhga4Q91XY4 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdhga4Q91XY4 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdhga4Q91XY4 AC154231.1-201ENSMUST00000220564 2175 ntBASIC16.67■□□□□ 0.26
Pcdhga4Q91XY4 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdhga4Q91XY4 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Pcdhga4Q91XY4 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC16.67■□□□□ 0.26
Pcdhga4Q91XY4 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdhga4Q91XY4 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdhga4Q91XY4 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdhga4Q91XY4 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdhga4Q91XY4 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC16.67■□□□□ 0.26
Pcdhga4Q91XY4 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdhga4Q91XY4 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdhga4Q91XY4 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Pcdhga4Q91XY4 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdhga4Q91XY4 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdhga4Q91XY4 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdhga4Q91XY4 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdhga4Q91XY4 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdhga4Q91XY4 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdhga4Q91XY4 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdhga4Q91XY4 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC16.66■□□□□ 0.26
Pcdhga4Q91XY4 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Pcdhga4Q91XY4 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdhga4Q91XY4 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdhga4Q91XY4 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdhga4Q91XY4 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdhga4Q91XY4 AC159205.6-201ENSMUST00000224935 887 ntBASIC16.66■□□□□ 0.26
Pcdhga4Q91XY4 AC158538.1-201ENSMUST00000225870 294 ntBASIC16.66■□□□□ 0.26
Pcdhga4Q91XY4 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdhga4Q91XY4 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Pcdhga4Q91XY4 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdhga4Q91XY4 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdhga4Q91XY4 Gm43338-201ENSMUST00000198617 2223 ntBASIC16.66■□□□□ 0.26
Pcdhga4Q91XY4 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdhga4Q91XY4 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Pcdhga4Q91XY4 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdhga4Q91XY4 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdhga4Q91XY4 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdhga4Q91XY4 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdhga4Q91XY4 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdhga4Q91XY4 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdhga4Q91XY4 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdhga4Q91XY4 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdhga4Q91XY4 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 10.3 ms