Protein–RNA interactions for Protein: Q91VN6

Ddx41, Probable ATP-dependent RNA helicase DDX41, mousemouse

Known RBP Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx41Q91VN6 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ddx41Q91VN6 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC19.44■□□□□ 0.7
Ddx41Q91VN6 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC19.44■□□□□ 0.7
Ddx41Q91VN6 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
Ddx41Q91VN6 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Ddx41Q91VN6 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Ddx41Q91VN6 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Ddx41Q91VN6 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Ddx41Q91VN6 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Ddx41Q91VN6 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Ddx41Q91VN6 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Ddx41Q91VN6 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ddx41Q91VN6 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Ddx41Q91VN6 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ddx41Q91VN6 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Ddx41Q91VN6 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ddx41Q91VN6 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ddx41Q91VN6 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC19.43■□□□□ 0.7
Ddx41Q91VN6 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ddx41Q91VN6 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ddx41Q91VN6 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC19.43■□□□□ 0.7
Ddx41Q91VN6 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ddx41Q91VN6 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Ddx41Q91VN6 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Ddx41Q91VN6 Gm21362-201ENSMUST00000194272 928 ntBASIC19.43■□□□□ 0.7
Ddx41Q91VN6 AC134329.2-201ENSMUST00000217897 428 ntBASIC19.43■□□□□ 0.7
Ddx41Q91VN6 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ddx41Q91VN6 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ddx41Q91VN6 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ddx41Q91VN6 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ddx41Q91VN6 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ddx41Q91VN6 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ddx41Q91VN6 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ddx41Q91VN6 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ddx41Q91VN6 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ddx41Q91VN6 Gm16061-201ENSMUST00000122167 857 ntBASIC19.42■□□□□ 0.7
Ddx41Q91VN6 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
Ddx41Q91VN6 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ddx41Q91VN6 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ddx41Q91VN6 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ddx41Q91VN6 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ddx41Q91VN6 Gm37166-201ENSMUST00000195473 2474 ntBASIC19.42■□□□□ 0.7
Ddx41Q91VN6 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ddx41Q91VN6 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Ddx41Q91VN6 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ddx41Q91VN6 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ddx41Q91VN6 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Ddx41Q91VN6 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ddx41Q91VN6 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Ddx41Q91VN6 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ddx41Q91VN6 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ddx41Q91VN6 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Ddx41Q91VN6 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC19.41■□□□□ 0.7
Ddx41Q91VN6 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ddx41Q91VN6 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ddx41Q91VN6 Gm22697-201ENSMUST00000175194 63 ntBASIC19.41■□□□□ 0.7
Ddx41Q91VN6 Gm6728-201ENSMUST00000178117 1065 ntBASIC19.41■□□□□ 0.7
Ddx41Q91VN6 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC19.41■□□□□ 0.7
Ddx41Q91VN6 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ddx41Q91VN6 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ddx41Q91VN6 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Ddx41Q91VN6 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Ddx41Q91VN6 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ddx41Q91VN6 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Ddx41Q91VN6 Gm20628-201ENSMUST00000177363 3215 ntBASIC19.41■□□□□ 0.7
Ddx41Q91VN6 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC19.41■□□□□ 0.7
Ddx41Q91VN6 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ddx41Q91VN6 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ddx41Q91VN6 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ddx41Q91VN6 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Ddx41Q91VN6 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Ddx41Q91VN6 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Ddx41Q91VN6 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Ddx41Q91VN6 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Ddx41Q91VN6 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC19.4■□□□□ 0.7
Ddx41Q91VN6 AA414768-201ENSMUST00000121924 1257 ntBASIC19.4■□□□□ 0.7
Ddx41Q91VN6 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Ddx41Q91VN6 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC19.4■□□□□ 0.7
Ddx41Q91VN6 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ddx41Q91VN6 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Ddx41Q91VN6 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC19.4■□□□□ 0.7
Ddx41Q91VN6 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Ddx41Q91VN6 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ddx41Q91VN6 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.7
Ddx41Q91VN6 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
Ddx41Q91VN6 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
Ddx41Q91VN6 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ddx41Q91VN6 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Ddx41Q91VN6 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC19.39■□□□□ 0.69
Ddx41Q91VN6 Gm6345-202ENSMUST00000180900 204 ntBASIC19.39■□□□□ 0.69
Ddx41Q91VN6 Gm18101-201ENSMUST00000215769 548 ntBASIC19.39■□□□□ 0.69
Ddx41Q91VN6 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Ddx41Q91VN6 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
Ddx41Q91VN6 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ddx41Q91VN6 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Ddx41Q91VN6 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ddx41Q91VN6 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ddx41Q91VN6 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ddx41Q91VN6 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Ddx41Q91VN6 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 43.7 ms