Protein–RNA interactions for Protein: Q8R429

Atp2a1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, mousemouse

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atp2a1Q8R429 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Atp2a1Q8R429 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Atp2a1Q8R429 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
Atp2a1Q8R429 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Atp2a1Q8R429 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC18.95■□□□□ 0.62
Atp2a1Q8R429 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Atp2a1Q8R429 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
Atp2a1Q8R429 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Atp2a1Q8R429 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
Atp2a1Q8R429 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Atp2a1Q8R429 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Atp2a1Q8R429 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC18.94■□□□□ 0.62
Atp2a1Q8R429 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Atp2a1Q8R429 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Atp2a1Q8R429 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Atp2a1Q8R429 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
Atp2a1Q8R429 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Atp2a1Q8R429 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
Atp2a1Q8R429 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC18.94■□□□□ 0.62
Atp2a1Q8R429 Gm11950-201ENSMUST00000121615 838 ntBASIC18.94■□□□□ 0.62
Atp2a1Q8R429 Gm11860-201ENSMUST00000122346 1010 ntBASIC18.94■□□□□ 0.62
Atp2a1Q8R429 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Atp2a1Q8R429 Gm37722-201ENSMUST00000193757 208 ntBASIC18.94■□□□□ 0.62
Atp2a1Q8R429 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
Atp2a1Q8R429 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Atp2a1Q8R429 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Atp2a1Q8R429 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Atp2a1Q8R429 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Atp2a1Q8R429 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Atp2a1Q8R429 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
Atp2a1Q8R429 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Atp2a1Q8R429 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Atp2a1Q8R429 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Atp2a1Q8R429 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Atp2a1Q8R429 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Atp2a1Q8R429 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC18.94■□□□□ 0.62
Atp2a1Q8R429 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Atp2a1Q8R429 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Atp2a1Q8R429 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC18.93■□□□□ 0.62
Atp2a1Q8R429 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Atp2a1Q8R429 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
Atp2a1Q8R429 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
Atp2a1Q8R429 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Atp2a1Q8R429 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC18.93■□□□□ 0.62
Atp2a1Q8R429 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC18.93■□□□□ 0.62
Atp2a1Q8R429 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Atp2a1Q8R429 AC130713.1-201ENSMUST00000228853 1096 ntBASIC18.93■□□□□ 0.62
Atp2a1Q8R429 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Atp2a1Q8R429 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Atp2a1Q8R429 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Atp2a1Q8R429 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Atp2a1Q8R429 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Atp2a1Q8R429 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Atp2a1Q8R429 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Atp2a1Q8R429 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Atp2a1Q8R429 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Atp2a1Q8R429 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Atp2a1Q8R429 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Atp2a1Q8R429 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Atp2a1Q8R429 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC18.92■□□□□ 0.62
Atp2a1Q8R429 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Atp2a1Q8R429 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Atp2a1Q8R429 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
Atp2a1Q8R429 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Atp2a1Q8R429 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
Atp2a1Q8R429 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Atp2a1Q8R429 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC18.92■□□□□ 0.62
Atp2a1Q8R429 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
Atp2a1Q8R429 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Atp2a1Q8R429 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Atp2a1Q8R429 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC18.92■□□□□ 0.62
Atp2a1Q8R429 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
Atp2a1Q8R429 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC18.91■□□□□ 0.62
Atp2a1Q8R429 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Atp2a1Q8R429 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Atp2a1Q8R429 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Atp2a1Q8R429 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Atp2a1Q8R429 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Atp2a1Q8R429 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Atp2a1Q8R429 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Atp2a1Q8R429 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC18.91■□□□□ 0.62
Atp2a1Q8R429 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
Atp2a1Q8R429 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC18.91■□□□□ 0.62
Atp2a1Q8R429 Gm27741-201ENSMUST00000185060 237 ntBASIC18.91■□□□□ 0.62
Atp2a1Q8R429 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC18.91■□□□□ 0.62
Atp2a1Q8R429 AC159205.3-201ENSMUST00000224614 874 ntBASIC18.91■□□□□ 0.62
Atp2a1Q8R429 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Atp2a1Q8R429 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
Atp2a1Q8R429 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC18.91■□□□□ 0.62
Atp2a1Q8R429 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC18.91■□□□□ 0.62
Atp2a1Q8R429 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Atp2a1Q8R429 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Atp2a1Q8R429 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Atp2a1Q8R429 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
Atp2a1Q8R429 Gm37194-201ENSMUST00000193092 3031 ntBASIC18.9■□□□□ 0.62
Atp2a1Q8R429 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC18.9■□□□□ 0.62
Atp2a1Q8R429 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Atp2a1Q8R429 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Atp2a1Q8R429 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Atp2a1Q8R429 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms