Protein–RNA interactions for Protein: Q8R2Q0

Trim29, Tripartite motif-containing protein 29, mousemouse

Predictions only

Length 587 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim29Q8R2Q0 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Trim29Q8R2Q0 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Trim29Q8R2Q0 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trim29Q8R2Q0 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trim29Q8R2Q0 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trim29Q8R2Q0 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trim29Q8R2Q0 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Trim29Q8R2Q0 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trim29Q8R2Q0 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trim29Q8R2Q0 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Trim29Q8R2Q0 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Trim29Q8R2Q0 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trim29Q8R2Q0 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trim29Q8R2Q0 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trim29Q8R2Q0 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trim29Q8R2Q0 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trim29Q8R2Q0 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC19.37■□□□□ 0.69
Trim29Q8R2Q0 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC19.37■□□□□ 0.69
Trim29Q8R2Q0 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC19.37■□□□□ 0.69
Trim29Q8R2Q0 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Trim29Q8R2Q0 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Trim29Q8R2Q0 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trim29Q8R2Q0 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trim29Q8R2Q0 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Trim29Q8R2Q0 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC19.37■□□□□ 0.69
Trim29Q8R2Q0 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trim29Q8R2Q0 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trim29Q8R2Q0 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trim29Q8R2Q0 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC19.37■□□□□ 0.69
Trim29Q8R2Q0 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trim29Q8R2Q0 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Trim29Q8R2Q0 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trim29Q8R2Q0 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Trim29Q8R2Q0 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trim29Q8R2Q0 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trim29Q8R2Q0 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC19.36■□□□□ 0.69
Trim29Q8R2Q0 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Trim29Q8R2Q0 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trim29Q8R2Q0 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trim29Q8R2Q0 Arhgef4-208ENSMUST00000211073 171 ntBASIC19.36■□□□□ 0.69
Trim29Q8R2Q0 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC19.36■□□□□ 0.69
Trim29Q8R2Q0 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trim29Q8R2Q0 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC19.36■□□□□ 0.69
Trim29Q8R2Q0 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC19.36■□□□□ 0.69
Trim29Q8R2Q0 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trim29Q8R2Q0 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Trim29Q8R2Q0 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trim29Q8R2Q0 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Trim29Q8R2Q0 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trim29Q8R2Q0 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC19.36■□□□□ 0.69
Trim29Q8R2Q0 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trim29Q8R2Q0 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Trim29Q8R2Q0 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trim29Q8R2Q0 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trim29Q8R2Q0 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Trim29Q8R2Q0 Gm16401-202ENSMUST00000197463 2074 ntBASIC19.36■□□□□ 0.69
Trim29Q8R2Q0 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trim29Q8R2Q0 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Trim29Q8R2Q0 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trim29Q8R2Q0 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trim29Q8R2Q0 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trim29Q8R2Q0 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trim29Q8R2Q0 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trim29Q8R2Q0 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trim29Q8R2Q0 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trim29Q8R2Q0 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trim29Q8R2Q0 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Trim29Q8R2Q0 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trim29Q8R2Q0 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Trim29Q8R2Q0 Gm13181-201ENSMUST00000120117 1069 ntBASIC19.35■□□□□ 0.69
Trim29Q8R2Q0 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Trim29Q8R2Q0 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC19.35■□□□□ 0.69
Trim29Q8R2Q0 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC19.35■□□□□ 0.69
Trim29Q8R2Q0 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trim29Q8R2Q0 Otx2os1-204ENSMUST00000227221 751 ntBASIC19.35■□□□□ 0.69
Trim29Q8R2Q0 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
Trim29Q8R2Q0 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trim29Q8R2Q0 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Trim29Q8R2Q0 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Trim29Q8R2Q0 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC19.35■□□□□ 0.69
Trim29Q8R2Q0 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trim29Q8R2Q0 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Trim29Q8R2Q0 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC19.35■□□□□ 0.69
Trim29Q8R2Q0 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Trim29Q8R2Q0 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
Trim29Q8R2Q0 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trim29Q8R2Q0 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Trim29Q8R2Q0 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC19.34■□□□□ 0.69
Trim29Q8R2Q0 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
Trim29Q8R2Q0 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Trim29Q8R2Q0 Il3ra-202ENSMUST00000223589 738 ntBASIC19.34■□□□□ 0.69
Trim29Q8R2Q0 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trim29Q8R2Q0 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trim29Q8R2Q0 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trim29Q8R2Q0 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trim29Q8R2Q0 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trim29Q8R2Q0 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Trim29Q8R2Q0 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
Trim29Q8R2Q0 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Trim29Q8R2Q0 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms