Protein–RNA interactions for Protein: Q8R1T1

Chmp7, Charged multivesicular body protein 7, mousemouse

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp7Q8R1T1 Gm12895-201ENSMUST00000122214 226 ntBASIC21.69■■□□□ 1.06
Chmp7Q8R1T1 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC21.69■■□□□ 1.06
Chmp7Q8R1T1 Mzt1-203ENSMUST00000227948 952 ntBASIC21.69■■□□□ 1.06
Chmp7Q8R1T1 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Chmp7Q8R1T1 Gm10461-201ENSMUST00000202073 4786 ntBASIC21.69■■□□□ 1.06
Chmp7Q8R1T1 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Chmp7Q8R1T1 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Chmp7Q8R1T1 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC21.69■■□□□ 1.06
Chmp7Q8R1T1 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
Chmp7Q8R1T1 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC21.69■■□□□ 1.06
Chmp7Q8R1T1 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Chmp7Q8R1T1 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Chmp7Q8R1T1 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Chmp7Q8R1T1 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Chmp7Q8R1T1 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Chmp7Q8R1T1 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Chmp7Q8R1T1 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
Chmp7Q8R1T1 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Chmp7Q8R1T1 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC21.68■■□□□ 1.06
Chmp7Q8R1T1 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
Chmp7Q8R1T1 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Chmp7Q8R1T1 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC21.68■■□□□ 1.06
Chmp7Q8R1T1 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC21.68■■□□□ 1.06
Chmp7Q8R1T1 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Chmp7Q8R1T1 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Chmp7Q8R1T1 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Chmp7Q8R1T1 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Chmp7Q8R1T1 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
Chmp7Q8R1T1 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Chmp7Q8R1T1 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
Chmp7Q8R1T1 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
Chmp7Q8R1T1 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC21.67■■□□□ 1.06
Chmp7Q8R1T1 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
Chmp7Q8R1T1 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Chmp7Q8R1T1 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Chmp7Q8R1T1 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Chmp7Q8R1T1 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
Chmp7Q8R1T1 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
Chmp7Q8R1T1 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
Chmp7Q8R1T1 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Chmp7Q8R1T1 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC21.66■■□□□ 1.06
Chmp7Q8R1T1 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Chmp7Q8R1T1 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Chmp7Q8R1T1 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Chmp7Q8R1T1 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Chmp7Q8R1T1 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC21.66■■□□□ 1.06
Chmp7Q8R1T1 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Chmp7Q8R1T1 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
Chmp7Q8R1T1 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Chmp7Q8R1T1 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Chmp7Q8R1T1 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
Chmp7Q8R1T1 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Chmp7Q8R1T1 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Chmp7Q8R1T1 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Chmp7Q8R1T1 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Chmp7Q8R1T1 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Chmp7Q8R1T1 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Chmp7Q8R1T1 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Chmp7Q8R1T1 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
Chmp7Q8R1T1 Gm27459-201ENSMUST00000184860 107 ntBASIC21.65■■□□□ 1.06
Chmp7Q8R1T1 Gm28659-201ENSMUST00000188013 759 ntBASIC21.65■■□□□ 1.06
Chmp7Q8R1T1 Gm44450-201ENSMUST00000199528 114 ntBASIC21.65■■□□□ 1.06
Chmp7Q8R1T1 AC153889.1-201ENSMUST00000219257 330 ntBASIC21.65■■□□□ 1.06
Chmp7Q8R1T1 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Chmp7Q8R1T1 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Chmp7Q8R1T1 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Chmp7Q8R1T1 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Chmp7Q8R1T1 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Chmp7Q8R1T1 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
Chmp7Q8R1T1 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Chmp7Q8R1T1 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Chmp7Q8R1T1 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC21.64■■□□□ 1.06
Chmp7Q8R1T1 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.06
Chmp7Q8R1T1 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Chmp7Q8R1T1 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Chmp7Q8R1T1 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Chmp7Q8R1T1 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC21.64■■□□□ 1.05
Chmp7Q8R1T1 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC21.64■■□□□ 1.05
Chmp7Q8R1T1 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC21.64■■□□□ 1.05
Chmp7Q8R1T1 Gm29707-201ENSMUST00000196325 491 ntBASIC21.64■■□□□ 1.05
Chmp7Q8R1T1 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Chmp7Q8R1T1 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Chmp7Q8R1T1 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Chmp7Q8R1T1 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
Chmp7Q8R1T1 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Chmp7Q8R1T1 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Chmp7Q8R1T1 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
Chmp7Q8R1T1 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Chmp7Q8R1T1 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Chmp7Q8R1T1 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Chmp7Q8R1T1 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC21.63■■□□□ 1.05
Chmp7Q8R1T1 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Chmp7Q8R1T1 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Chmp7Q8R1T1 Gm43347-201ENSMUST00000200226 580 ntBASIC21.63■■□□□ 1.05
Chmp7Q8R1T1 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Chmp7Q8R1T1 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Chmp7Q8R1T1 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Chmp7Q8R1T1 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Chmp7Q8R1T1 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Chmp7Q8R1T1 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms