Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Clrn1Q8K445 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC16.02■□□□□ 0.16
Clrn1Q8K445 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC16.02■□□□□ 0.16
Clrn1Q8K445 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Clrn1Q8K445 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Clrn1Q8K445 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Clrn1Q8K445 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC16.02■□□□□ 0.16
Clrn1Q8K445 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Clrn1Q8K445 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Clrn1Q8K445 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC16.02■□□□□ 0.15
Clrn1Q8K445 Gm5898-201ENSMUST00000121016 2071 ntBASIC16.02■□□□□ 0.15
Clrn1Q8K445 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Clrn1Q8K445 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Clrn1Q8K445 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Clrn1Q8K445 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Clrn1Q8K445 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Clrn1Q8K445 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Clrn1Q8K445 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
Clrn1Q8K445 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC16.01■□□□□ 0.15
Clrn1Q8K445 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Clrn1Q8K445 Gm15635-204ENSMUST00000208024 2539 ntBASIC16.01■□□□□ 0.15
Clrn1Q8K445 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC16.01■□□□□ 0.15
Clrn1Q8K445 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Clrn1Q8K445 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
Clrn1Q8K445 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Clrn1Q8K445 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Clrn1Q8K445 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Clrn1Q8K445 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Clrn1Q8K445 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC16.01■□□□□ 0.15
Clrn1Q8K445 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC16.01■□□□□ 0.15
Clrn1Q8K445 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Clrn1Q8K445 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Clrn1Q8K445 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Clrn1Q8K445 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Clrn1Q8K445 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Clrn1Q8K445 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Clrn1Q8K445 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Clrn1Q8K445 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Clrn1Q8K445 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Clrn1Q8K445 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Clrn1Q8K445 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Clrn1Q8K445 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Clrn1Q8K445 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Clrn1Q8K445 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
Clrn1Q8K445 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC16■□□□□ 0.15
Clrn1Q8K445 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Clrn1Q8K445 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Clrn1Q8K445 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Clrn1Q8K445 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
Clrn1Q8K445 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
Clrn1Q8K445 Gm9484-201ENSMUST00000195892 1159 ntBASIC16■□□□□ 0.15
Clrn1Q8K445 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Clrn1Q8K445 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Clrn1Q8K445 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Clrn1Q8K445 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Clrn1Q8K445 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Clrn1Q8K445 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Clrn1Q8K445 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC16■□□□□ 0.15
Clrn1Q8K445 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Clrn1Q8K445 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Clrn1Q8K445 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Clrn1Q8K445 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Clrn1Q8K445 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC15.99■□□□□ 0.15
Clrn1Q8K445 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Clrn1Q8K445 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Clrn1Q8K445 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
Clrn1Q8K445 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Clrn1Q8K445 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Clrn1Q8K445 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC15.99■□□□□ 0.15
Clrn1Q8K445 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Clrn1Q8K445 Gm7791-201ENSMUST00000219066 539 ntBASIC15.99■□□□□ 0.15
Clrn1Q8K445 AC120002.2-201ENSMUST00000220205 773 ntBASIC15.99■□□□□ 0.15
Clrn1Q8K445 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Clrn1Q8K445 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Clrn1Q8K445 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Clrn1Q8K445 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
Clrn1Q8K445 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC15.99■□□□□ 0.15
Clrn1Q8K445 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Clrn1Q8K445 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
Clrn1Q8K445 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Clrn1Q8K445 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Clrn1Q8K445 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Clrn1Q8K445 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Clrn1Q8K445 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
Clrn1Q8K445 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
Clrn1Q8K445 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Clrn1Q8K445 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC15.98■□□□□ 0.15
Clrn1Q8K445 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Clrn1Q8K445 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Clrn1Q8K445 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
Clrn1Q8K445 Gm27463-201ENSMUST00000183569 57 ntBASIC15.98■□□□□ 0.15
Clrn1Q8K445 Gm10252-201ENSMUST00000209541 832 ntBASIC15.98■□□□□ 0.15
Clrn1Q8K445 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC15.98■□□□□ 0.15
Clrn1Q8K445 Gm30025-201ENSMUST00000218555 728 ntBASIC15.98■□□□□ 0.15
Clrn1Q8K445 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Clrn1Q8K445 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
Clrn1Q8K445 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
Clrn1Q8K445 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Clrn1Q8K445 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
Clrn1Q8K445 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 10.8 ms