Protein–RNA interactions for Protein: Q8JZK9

Hmgcs1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, mousemouse

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgcs1Q8JZK9 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Hmgcs1Q8JZK9 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Hmgcs1Q8JZK9 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Hmgcs1Q8JZK9 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Hmgcs1Q8JZK9 Cxcl14-202ENSMUST00000224801 1467 ntBASIC16.19■□□□□ 0.18
Hmgcs1Q8JZK9 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Hmgcs1Q8JZK9 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Hmgcs1Q8JZK9 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Hmgcs1Q8JZK9 Gm10653-202ENSMUST00000139570 835 ntBASIC16.19■□□□□ 0.18
Hmgcs1Q8JZK9 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC16.19■□□□□ 0.18
Hmgcs1Q8JZK9 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Hmgcs1Q8JZK9 Gm10698-201ENSMUST00000182663 604 ntBASIC16.19■□□□□ 0.18
Hmgcs1Q8JZK9 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Hmgcs1Q8JZK9 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Hmgcs1Q8JZK9 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Hmgcs1Q8JZK9 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Hmgcs1Q8JZK9 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Hmgcs1Q8JZK9 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC16.19■□□□□ 0.18
Hmgcs1Q8JZK9 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Hmgcs1Q8JZK9 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Hmgcs1Q8JZK9 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Hmgcs1Q8JZK9 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Hmgcs1Q8JZK9 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Hmgcs1Q8JZK9 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC16.18■□□□□ 0.18
Hmgcs1Q8JZK9 AC124581.1-201ENSMUST00000225416 1399 ntBASIC16.18■□□□□ 0.18
Hmgcs1Q8JZK9 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Hmgcs1Q8JZK9 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Hmgcs1Q8JZK9 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Hmgcs1Q8JZK9 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC16.18■□□□□ 0.18
Hmgcs1Q8JZK9 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Hmgcs1Q8JZK9 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC16.18■□□□□ 0.18
Hmgcs1Q8JZK9 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Hmgcs1Q8JZK9 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC16.18■□□□□ 0.18
Hmgcs1Q8JZK9 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC16.18■□□□□ 0.18
Hmgcs1Q8JZK9 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC16.18■□□□□ 0.18
Hmgcs1Q8JZK9 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC16.18■□□□□ 0.18
Hmgcs1Q8JZK9 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Hmgcs1Q8JZK9 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Hmgcs1Q8JZK9 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Hmgcs1Q8JZK9 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Hmgcs1Q8JZK9 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Hmgcs1Q8JZK9 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC16.17■□□□□ 0.18
Hmgcs1Q8JZK9 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC16.17■□□□□ 0.18
Hmgcs1Q8JZK9 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Hmgcs1Q8JZK9 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Hmgcs1Q8JZK9 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Hmgcs1Q8JZK9 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Hmgcs1Q8JZK9 Gm20760-201ENSMUST00000179197 648 ntBASIC16.17■□□□□ 0.18
Hmgcs1Q8JZK9 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC16.17■□□□□ 0.18
Hmgcs1Q8JZK9 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Hmgcs1Q8JZK9 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Hmgcs1Q8JZK9 Gm36858-201ENSMUST00000194501 2391 ntBASIC16.17■□□□□ 0.18
Hmgcs1Q8JZK9 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
Hmgcs1Q8JZK9 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Hmgcs1Q8JZK9 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
Hmgcs1Q8JZK9 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Hmgcs1Q8JZK9 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Hmgcs1Q8JZK9 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC16.17■□□□□ 0.18
Hmgcs1Q8JZK9 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
Hmgcs1Q8JZK9 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Hmgcs1Q8JZK9 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Hmgcs1Q8JZK9 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC16.17■□□□□ 0.18
Hmgcs1Q8JZK9 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Hmgcs1Q8JZK9 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Hmgcs1Q8JZK9 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Hmgcs1Q8JZK9 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Hmgcs1Q8JZK9 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Hmgcs1Q8JZK9 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Hmgcs1Q8JZK9 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Hmgcs1Q8JZK9 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC16.16■□□□□ 0.18
Hmgcs1Q8JZK9 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Hmgcs1Q8JZK9 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC16.16■□□□□ 0.18
Hmgcs1Q8JZK9 Gm13216-201ENSMUST00000117145 591 ntBASIC16.16■□□□□ 0.18
Hmgcs1Q8JZK9 Gm15378-201ENSMUST00000121894 207 ntBASIC16.16■□□□□ 0.18
Hmgcs1Q8JZK9 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC16.16■□□□□ 0.18
Hmgcs1Q8JZK9 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Hmgcs1Q8JZK9 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Hmgcs1Q8JZK9 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Hmgcs1Q8JZK9 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Hmgcs1Q8JZK9 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Hmgcs1Q8JZK9 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Hmgcs1Q8JZK9 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Hmgcs1Q8JZK9 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Hmgcs1Q8JZK9 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Hmgcs1Q8JZK9 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Hmgcs1Q8JZK9 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Hmgcs1Q8JZK9 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Hmgcs1Q8JZK9 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Hmgcs1Q8JZK9 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Hmgcs1Q8JZK9 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Hmgcs1Q8JZK9 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Hmgcs1Q8JZK9 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Hmgcs1Q8JZK9 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
Hmgcs1Q8JZK9 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Hmgcs1Q8JZK9 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC16.15■□□□□ 0.18
Hmgcs1Q8JZK9 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Hmgcs1Q8JZK9 Gm20628-201ENSMUST00000177363 3215 ntBASIC16.15■□□□□ 0.18
Hmgcs1Q8JZK9 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Hmgcs1Q8JZK9 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Hmgcs1Q8JZK9 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC16.15■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 36.7 ms