Protein–RNA interactions for Protein: Q8CG80

Shf, SH2 domain-containing adapter protein F, mousemouse

Predictions only

Length 238 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShfQ8CG80 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
ShfQ8CG80 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
ShfQ8CG80 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
ShfQ8CG80 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
ShfQ8CG80 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
ShfQ8CG80 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
ShfQ8CG80 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
ShfQ8CG80 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
ShfQ8CG80 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
ShfQ8CG80 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
ShfQ8CG80 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
ShfQ8CG80 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
ShfQ8CG80 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
ShfQ8CG80 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
ShfQ8CG80 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
ShfQ8CG80 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
ShfQ8CG80 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
ShfQ8CG80 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
ShfQ8CG80 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
ShfQ8CG80 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
ShfQ8CG80 Gm43183-201ENSMUST00000200632 547 ntBASIC15.13■□□□□ 0.01
ShfQ8CG80 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
ShfQ8CG80 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
ShfQ8CG80 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
ShfQ8CG80 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC15.13■□□□□ 0.01
ShfQ8CG80 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
ShfQ8CG80 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
ShfQ8CG80 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC15.13■□□□□ 0.01
ShfQ8CG80 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
ShfQ8CG80 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
ShfQ8CG80 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
ShfQ8CG80 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
ShfQ8CG80 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
ShfQ8CG80 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
ShfQ8CG80 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
ShfQ8CG80 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
ShfQ8CG80 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
ShfQ8CG80 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
ShfQ8CG80 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
ShfQ8CG80 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
ShfQ8CG80 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
ShfQ8CG80 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
ShfQ8CG80 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
ShfQ8CG80 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
ShfQ8CG80 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
ShfQ8CG80 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
ShfQ8CG80 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
ShfQ8CG80 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
ShfQ8CG80 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC15.12■□□□□ 0.01
ShfQ8CG80 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
ShfQ8CG80 AC164629.5-201ENSMUST00000220387 632 ntBASIC15.12■□□□□ 0.01
ShfQ8CG80 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
ShfQ8CG80 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC15.12■□□□□ 0.01
ShfQ8CG80 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
ShfQ8CG80 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
ShfQ8CG80 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
ShfQ8CG80 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
ShfQ8CG80 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
ShfQ8CG80 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
ShfQ8CG80 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
ShfQ8CG80 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
ShfQ8CG80 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
ShfQ8CG80 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
ShfQ8CG80 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC15.11■□□□□ 0.01
ShfQ8CG80 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
ShfQ8CG80 Nrn1-203ENSMUST00000223611 1443 ntBASIC15.11■□□□□ 0.01
ShfQ8CG80 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
ShfQ8CG80 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
ShfQ8CG80 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC15.11■□□□□ 0.01
ShfQ8CG80 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
ShfQ8CG80 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC15.11■□□□□ 0.01
ShfQ8CG80 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
ShfQ8CG80 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
ShfQ8CG80 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
ShfQ8CG80 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
ShfQ8CG80 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
ShfQ8CG80 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
ShfQ8CG80 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
ShfQ8CG80 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
ShfQ8CG80 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
ShfQ8CG80 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
ShfQ8CG80 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
ShfQ8CG80 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
ShfQ8CG80 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
ShfQ8CG80 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
ShfQ8CG80 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
ShfQ8CG80 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
ShfQ8CG80 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
ShfQ8CG80 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
ShfQ8CG80 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
ShfQ8CG80 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
ShfQ8CG80 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
ShfQ8CG80 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
ShfQ8CG80 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC15.1■□□□□ 0.01
ShfQ8CG80 Gm12441-201ENSMUST00000121806 588 ntBASIC15.1■□□□□ 0.01
ShfQ8CG80 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC15.1■□□□□ 0.01
ShfQ8CG80 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC15.1■□□□□ 0.01
ShfQ8CG80 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
ShfQ8CG80 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC15.1■□□□□ 0.01
ShfQ8CG80 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms