Protein–RNA interactions for Protein: Q8CC35

Synpo, Synaptopodin, mousemouse

Known RBP Predictions only

Length 929 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SynpoQ8CC35 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
SynpoQ8CC35 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SynpoQ8CC35 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SynpoQ8CC35 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC16.4■□□□□ 0.22
SynpoQ8CC35 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
SynpoQ8CC35 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SynpoQ8CC35 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SynpoQ8CC35 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC16.4■□□□□ 0.22
SynpoQ8CC35 Gm7889-201ENSMUST00000185591 958 ntBASIC16.4■□□□□ 0.22
SynpoQ8CC35 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SynpoQ8CC35 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC16.4■□□□□ 0.22
SynpoQ8CC35 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SynpoQ8CC35 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
SynpoQ8CC35 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
SynpoQ8CC35 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
SynpoQ8CC35 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
SynpoQ8CC35 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
SynpoQ8CC35 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
SynpoQ8CC35 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC16.4■□□□□ 0.22
SynpoQ8CC35 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
SynpoQ8CC35 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
SynpoQ8CC35 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
SynpoQ8CC35 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SynpoQ8CC35 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SynpoQ8CC35 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC16.39■□□□□ 0.21
SynpoQ8CC35 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SynpoQ8CC35 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
SynpoQ8CC35 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SynpoQ8CC35 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC16.39■□□□□ 0.21
SynpoQ8CC35 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
SynpoQ8CC35 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SynpoQ8CC35 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SynpoQ8CC35 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SynpoQ8CC35 Gm12085-201ENSMUST00000119263 940 ntBASIC16.39■□□□□ 0.21
SynpoQ8CC35 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC16.39■□□□□ 0.21
SynpoQ8CC35 Gm27463-201ENSMUST00000183569 57 ntBASIC16.39■□□□□ 0.21
SynpoQ8CC35 Gm9694-201ENSMUST00000193347 1189 ntBASIC16.39■□□□□ 0.21
SynpoQ8CC35 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SynpoQ8CC35 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC16.39■□□□□ 0.21
SynpoQ8CC35 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC16.39■□□□□ 0.21
SynpoQ8CC35 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SynpoQ8CC35 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SynpoQ8CC35 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SynpoQ8CC35 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC16.39■□□□□ 0.21
SynpoQ8CC35 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SynpoQ8CC35 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC16.39■□□□□ 0.21
SynpoQ8CC35 Gm43808-201ENSMUST00000202534 2065 ntBASIC16.39■□□□□ 0.21
SynpoQ8CC35 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC16.39■□□□□ 0.21
SynpoQ8CC35 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
SynpoQ8CC35 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SynpoQ8CC35 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
SynpoQ8CC35 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
SynpoQ8CC35 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC16.38■□□□□ 0.21
SynpoQ8CC35 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
SynpoQ8CC35 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC16.38■□□□□ 0.21
SynpoQ8CC35 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
SynpoQ8CC35 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SynpoQ8CC35 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SynpoQ8CC35 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
SynpoQ8CC35 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
SynpoQ8CC35 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC16.38■□□□□ 0.21
SynpoQ8CC35 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
SynpoQ8CC35 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
SynpoQ8CC35 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
SynpoQ8CC35 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC16.38■□□□□ 0.21
SynpoQ8CC35 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SynpoQ8CC35 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SynpoQ8CC35 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SynpoQ8CC35 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
SynpoQ8CC35 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SynpoQ8CC35 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
SynpoQ8CC35 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SynpoQ8CC35 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC16.38■□□□□ 0.21
SynpoQ8CC35 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SynpoQ8CC35 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
SynpoQ8CC35 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SynpoQ8CC35 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
SynpoQ8CC35 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SynpoQ8CC35 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
SynpoQ8CC35 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
SynpoQ8CC35 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
SynpoQ8CC35 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SynpoQ8CC35 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
SynpoQ8CC35 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
SynpoQ8CC35 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SynpoQ8CC35 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
SynpoQ8CC35 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SynpoQ8CC35 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SynpoQ8CC35 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SynpoQ8CC35 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
SynpoQ8CC35 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
SynpoQ8CC35 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC16.37■□□□□ 0.21
SynpoQ8CC35 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
SynpoQ8CC35 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SynpoQ8CC35 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SynpoQ8CC35 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC16.37■□□□□ 0.21
SynpoQ8CC35 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC16.37■□□□□ 0.21
SynpoQ8CC35 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SynpoQ8CC35 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
SynpoQ8CC35 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 47.1 ms