Protein–RNA interactions for Protein: Q8C4J0

Ccdc60, Coiled-coil domain-containing protein 60, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc60Q8C4J0 Gm16061-201ENSMUST00000122167 857 ntBASIC21.64■■□□□ 1.05
Ccdc60Q8C4J0 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Ccdc60Q8C4J0 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
Ccdc60Q8C4J0 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC21.64■■□□□ 1.05
Ccdc60Q8C4J0 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Ccdc60Q8C4J0 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
Ccdc60Q8C4J0 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
Ccdc60Q8C4J0 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Ccdc60Q8C4J0 Gm11620-201ENSMUST00000118770 1845 ntBASIC21.64■■□□□ 1.05
Ccdc60Q8C4J0 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Ccdc60Q8C4J0 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
Ccdc60Q8C4J0 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Ccdc60Q8C4J0 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
Ccdc60Q8C4J0 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC21.63■■□□□ 1.05
Ccdc60Q8C4J0 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
Ccdc60Q8C4J0 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC21.63■■□□□ 1.05
Ccdc60Q8C4J0 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC21.63■■□□□ 1.05
Ccdc60Q8C4J0 Mir5130-201ENSMUST00000175160 84 ntBASIC21.63■■□□□ 1.05
Ccdc60Q8C4J0 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC21.63■■□□□ 1.05
Ccdc60Q8C4J0 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC21.63■■□□□ 1.05
Ccdc60Q8C4J0 Gm45058-201ENSMUST00000205810 766 ntBASIC21.63■■□□□ 1.05
Ccdc60Q8C4J0 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC21.63■■□□□ 1.05
Ccdc60Q8C4J0 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC21.63■■□□□ 1.05
Ccdc60Q8C4J0 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Ccdc60Q8C4J0 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Ccdc60Q8C4J0 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Ccdc60Q8C4J0 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
Ccdc60Q8C4J0 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
Ccdc60Q8C4J0 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Ccdc60Q8C4J0 AL590614.2-201ENSMUST00000225374 1937 ntBASIC21.63■■□□□ 1.05
Ccdc60Q8C4J0 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
Ccdc60Q8C4J0 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Ccdc60Q8C4J0 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Ccdc60Q8C4J0 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC21.62■■□□□ 1.05
Ccdc60Q8C4J0 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC21.62■■□□□ 1.05
Ccdc60Q8C4J0 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Ccdc60Q8C4J0 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Ccdc60Q8C4J0 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Ccdc60Q8C4J0 Spsb2-203ENSMUST00000112473 1322 ntBASIC21.62■■□□□ 1.05
Ccdc60Q8C4J0 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
Ccdc60Q8C4J0 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Ccdc60Q8C4J0 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Ccdc60Q8C4J0 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC21.62■■□□□ 1.05
Ccdc60Q8C4J0 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Ccdc60Q8C4J0 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Ccdc60Q8C4J0 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Ccdc60Q8C4J0 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
Ccdc60Q8C4J0 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
Ccdc60Q8C4J0 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Ccdc60Q8C4J0 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
Ccdc60Q8C4J0 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Ccdc60Q8C4J0 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Ccdc60Q8C4J0 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Ccdc60Q8C4J0 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Ccdc60Q8C4J0 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Ccdc60Q8C4J0 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
Ccdc60Q8C4J0 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
Ccdc60Q8C4J0 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
Ccdc60Q8C4J0 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Ccdc60Q8C4J0 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Ccdc60Q8C4J0 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC21.61■■□□□ 1.05
Ccdc60Q8C4J0 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
Ccdc60Q8C4J0 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC21.6■■□□□ 1.05
Ccdc60Q8C4J0 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Ccdc60Q8C4J0 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Ccdc60Q8C4J0 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Ccdc60Q8C4J0 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Ccdc60Q8C4J0 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Ccdc60Q8C4J0 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
Ccdc60Q8C4J0 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Ccdc60Q8C4J0 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Ccdc60Q8C4J0 Gm19439-201ENSMUST00000198195 2273 ntBASIC21.6■■□□□ 1.05
Ccdc60Q8C4J0 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Ccdc60Q8C4J0 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
Ccdc60Q8C4J0 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
Ccdc60Q8C4J0 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC21.6■■□□□ 1.05
Ccdc60Q8C4J0 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC21.6■■□□□ 1.05
Ccdc60Q8C4J0 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
Ccdc60Q8C4J0 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Ccdc60Q8C4J0 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Ccdc60Q8C4J0 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC21.59■■□□□ 1.05
Ccdc60Q8C4J0 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Ccdc60Q8C4J0 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Ccdc60Q8C4J0 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Ccdc60Q8C4J0 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Ccdc60Q8C4J0 Gm13474-201ENSMUST00000122466 815 ntBASIC21.59■■□□□ 1.05
Ccdc60Q8C4J0 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Ccdc60Q8C4J0 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Ccdc60Q8C4J0 Gm29994-201ENSMUST00000195495 1193 ntBASIC21.59■■□□□ 1.05
Ccdc60Q8C4J0 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
Ccdc60Q8C4J0 Wnt10b-204ENSMUST00000226655 1807 ntBASIC21.59■■□□□ 1.05
Ccdc60Q8C4J0 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC21.59■■□□□ 1.05
Ccdc60Q8C4J0 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Ccdc60Q8C4J0 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC21.59■■□□□ 1.05
Ccdc60Q8C4J0 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC21.58■■□□□ 1.05
Ccdc60Q8C4J0 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC21.58■■□□□ 1.05
Ccdc60Q8C4J0 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC21.58■■□□□ 1.05
Ccdc60Q8C4J0 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC21.58■■□□□ 1.05
Ccdc60Q8C4J0 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC21.58■■□□□ 1.05
Ccdc60Q8C4J0 Gm10231-201ENSMUST00000181584 441 ntBASIC21.58■■□□□ 1.05
Retrieved 100 of 76,532 protein–RNA pairs in 39.1 ms