Protein–RNA interactions for Protein: Q8C120

Sh3rf3, SH3 domain-containing RING finger protein 3, mousemouse

Predictions only

Length 878 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf3Q8C120 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Sh3rf3Q8C120 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Sh3rf3Q8C120 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Sh3rf3Q8C120 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Sh3rf3Q8C120 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Sh3rf3Q8C120 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Sh3rf3Q8C120 Gm7791-201ENSMUST00000219066 539 ntBASIC17.66■□□□□ 0.42
Sh3rf3Q8C120 Odf3b-204ENSMUST00000227834 930 ntBASIC17.66■□□□□ 0.42
Sh3rf3Q8C120 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Sh3rf3Q8C120 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Sh3rf3Q8C120 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Sh3rf3Q8C120 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Sh3rf3Q8C120 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Sh3rf3Q8C120 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Sh3rf3Q8C120 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Sh3rf3Q8C120 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Sh3rf3Q8C120 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Sh3rf3Q8C120 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Sh3rf3Q8C120 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Sh3rf3Q8C120 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Sh3rf3Q8C120 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Sh3rf3Q8C120 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Sh3rf3Q8C120 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC17.65■□□□□ 0.42
Sh3rf3Q8C120 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Sh3rf3Q8C120 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Sh3rf3Q8C120 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Sh3rf3Q8C120 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Sh3rf3Q8C120 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC17.65■□□□□ 0.42
Sh3rf3Q8C120 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Sh3rf3Q8C120 Gm9731-201ENSMUST00000209480 747 ntBASIC17.65■□□□□ 0.42
Sh3rf3Q8C120 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC17.65■□□□□ 0.42
Sh3rf3Q8C120 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Sh3rf3Q8C120 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Sh3rf3Q8C120 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Sh3rf3Q8C120 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Sh3rf3Q8C120 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Sh3rf3Q8C120 Gm26917-202ENSMUST00000192833 3329 ntBASIC17.65■□□□□ 0.42
Sh3rf3Q8C120 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Sh3rf3Q8C120 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Sh3rf3Q8C120 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
Sh3rf3Q8C120 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Sh3rf3Q8C120 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Sh3rf3Q8C120 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Sh3rf3Q8C120 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Sh3rf3Q8C120 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Sh3rf3Q8C120 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Sh3rf3Q8C120 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Sh3rf3Q8C120 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Sh3rf3Q8C120 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC17.64■□□□□ 0.41
Sh3rf3Q8C120 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Sh3rf3Q8C120 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Sh3rf3Q8C120 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC17.64■□□□□ 0.41
Sh3rf3Q8C120 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Sh3rf3Q8C120 Gm5417-201ENSMUST00000079706 384 ntBASIC17.64■□□□□ 0.41
Sh3rf3Q8C120 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Sh3rf3Q8C120 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC17.64■□□□□ 0.41
Sh3rf3Q8C120 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
Sh3rf3Q8C120 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Sh3rf3Q8C120 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Sh3rf3Q8C120 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Sh3rf3Q8C120 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC17.64■□□□□ 0.41
Sh3rf3Q8C120 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Sh3rf3Q8C120 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
Sh3rf3Q8C120 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Sh3rf3Q8C120 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Sh3rf3Q8C120 Haglr-201ENSMUST00000100000 2085 ntBASIC17.63■□□□□ 0.41
Sh3rf3Q8C120 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Sh3rf3Q8C120 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Sh3rf3Q8C120 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Sh3rf3Q8C120 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
Sh3rf3Q8C120 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC17.63■□□□□ 0.41
Sh3rf3Q8C120 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Sh3rf3Q8C120 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Sh3rf3Q8C120 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Sh3rf3Q8C120 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Sh3rf3Q8C120 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Sh3rf3Q8C120 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Sh3rf3Q8C120 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC17.63■□□□□ 0.41
Sh3rf3Q8C120 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Sh3rf3Q8C120 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Sh3rf3Q8C120 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Sh3rf3Q8C120 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Sh3rf3Q8C120 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Sh3rf3Q8C120 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Sh3rf3Q8C120 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Sh3rf3Q8C120 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Sh3rf3Q8C120 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Sh3rf3Q8C120 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Sh3rf3Q8C120 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC17.63■□□□□ 0.41
Sh3rf3Q8C120 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Sh3rf3Q8C120 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Sh3rf3Q8C120 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Sh3rf3Q8C120 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Sh3rf3Q8C120 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Sh3rf3Q8C120 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Sh3rf3Q8C120 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Sh3rf3Q8C120 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Sh3rf3Q8C120 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Sh3rf3Q8C120 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC17.62■□□□□ 0.41
Sh3rf3Q8C120 Gm37055-201ENSMUST00000191866 133 ntBASIC17.62■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms