Protein–RNA interactions for Protein: Q8C0Q4

Nek11, Serine/threonine-protein kinase Nek11, mousemouse

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nek11Q8C0Q4 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC20.11■□□□□ 0.81
Nek11Q8C0Q4 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Nek11Q8C0Q4 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Nek11Q8C0Q4 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Nek11Q8C0Q4 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Nek11Q8C0Q4 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Nek11Q8C0Q4 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Nek11Q8C0Q4 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Nek11Q8C0Q4 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Nek11Q8C0Q4 AC122335.2-201ENSMUST00000213901 6181 ntBASIC20.1■□□□□ 0.81
Nek11Q8C0Q4 Mir5130-201ENSMUST00000175160 84 ntBASIC20.1■□□□□ 0.81
Nek11Q8C0Q4 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Nek11Q8C0Q4 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Nek11Q8C0Q4 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
Nek11Q8C0Q4 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC20.1■□□□□ 0.81
Nek11Q8C0Q4 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Nek11Q8C0Q4 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Nek11Q8C0Q4 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Nek11Q8C0Q4 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Nek11Q8C0Q4 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Nek11Q8C0Q4 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Nek11Q8C0Q4 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Nek11Q8C0Q4 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Nek11Q8C0Q4 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Nek11Q8C0Q4 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Nek11Q8C0Q4 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
Nek11Q8C0Q4 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC20.09■□□□□ 0.81
Nek11Q8C0Q4 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC20.09■□□□□ 0.81
Nek11Q8C0Q4 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Nek11Q8C0Q4 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Nek11Q8C0Q4 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Nek11Q8C0Q4 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Nek11Q8C0Q4 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Nek11Q8C0Q4 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.81
Nek11Q8C0Q4 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Nek11Q8C0Q4 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Nek11Q8C0Q4 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Nek11Q8C0Q4 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Nek11Q8C0Q4 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Nek11Q8C0Q4 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Nek11Q8C0Q4 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC20.08■□□□□ 0.81
Nek11Q8C0Q4 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.81
Nek11Q8C0Q4 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Nek11Q8C0Q4 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Nek11Q8C0Q4 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Nek11Q8C0Q4 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Nek11Q8C0Q4 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Nek11Q8C0Q4 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Nek11Q8C0Q4 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Nek11Q8C0Q4 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Nek11Q8C0Q4 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Nek11Q8C0Q4 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Nek11Q8C0Q4 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Nek11Q8C0Q4 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC20.07■□□□□ 0.8
Nek11Q8C0Q4 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
Nek11Q8C0Q4 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Nek11Q8C0Q4 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Nek11Q8C0Q4 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Nek11Q8C0Q4 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Nek11Q8C0Q4 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Nek11Q8C0Q4 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Nek11Q8C0Q4 Gm9987-201ENSMUST00000069768 567 ntBASIC20.07■□□□□ 0.8
Nek11Q8C0Q4 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Nek11Q8C0Q4 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Nek11Q8C0Q4 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC20.07■□□□□ 0.8
Nek11Q8C0Q4 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
Nek11Q8C0Q4 Actl10-202ENSMUST00000226583 1501 ntBASIC20.07■□□□□ 0.8
Nek11Q8C0Q4 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Nek11Q8C0Q4 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Nek11Q8C0Q4 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
Nek11Q8C0Q4 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Nek11Q8C0Q4 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Nek11Q8C0Q4 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC20.06■□□□□ 0.8
Nek11Q8C0Q4 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Nek11Q8C0Q4 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
Nek11Q8C0Q4 Gm7213-201ENSMUST00000215977 950 ntBASIC20.06■□□□□ 0.8
Nek11Q8C0Q4 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC20.06■□□□□ 0.8
Nek11Q8C0Q4 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Nek11Q8C0Q4 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Nek11Q8C0Q4 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Nek11Q8C0Q4 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC20.06■□□□□ 0.8
Nek11Q8C0Q4 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
Nek11Q8C0Q4 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Nek11Q8C0Q4 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Nek11Q8C0Q4 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Nek11Q8C0Q4 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Nek11Q8C0Q4 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Nek11Q8C0Q4 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
Nek11Q8C0Q4 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
Nek11Q8C0Q4 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
Nek11Q8C0Q4 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Nek11Q8C0Q4 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC20.05■□□□□ 0.8
Nek11Q8C0Q4 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Nek11Q8C0Q4 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Nek11Q8C0Q4 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Nek11Q8C0Q4 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Nek11Q8C0Q4 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
Nek11Q8C0Q4 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Nek11Q8C0Q4 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Nek11Q8C0Q4 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms