Protein–RNA interactions for Protein: Q8BUM9

Usp43, Ubiquitin carboxyl-terminal hydrolase 43, mousemouse

Predictions only

Length 1,132 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp43Q8BUM9 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Usp43Q8BUM9 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC17.17■□□□□ 0.34
Usp43Q8BUM9 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC17.17■□□□□ 0.34
Usp43Q8BUM9 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Usp43Q8BUM9 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC17.17■□□□□ 0.34
Usp43Q8BUM9 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Usp43Q8BUM9 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Usp43Q8BUM9 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Usp43Q8BUM9 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Usp43Q8BUM9 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Usp43Q8BUM9 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Usp43Q8BUM9 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Usp43Q8BUM9 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Usp43Q8BUM9 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Usp43Q8BUM9 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Usp43Q8BUM9 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Usp43Q8BUM9 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Usp43Q8BUM9 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Usp43Q8BUM9 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Usp43Q8BUM9 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC17.16■□□□□ 0.34
Usp43Q8BUM9 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Usp43Q8BUM9 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Usp43Q8BUM9 Gm20472-201ENSMUST00000174403 1240 ntBASIC17.16■□□□□ 0.34
Usp43Q8BUM9 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC17.16■□□□□ 0.34
Usp43Q8BUM9 AC107711.5-202ENSMUST00000226429 702 ntBASIC17.16■□□□□ 0.34
Usp43Q8BUM9 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Usp43Q8BUM9 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Usp43Q8BUM9 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Usp43Q8BUM9 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Usp43Q8BUM9 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Usp43Q8BUM9 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Usp43Q8BUM9 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Usp43Q8BUM9 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Usp43Q8BUM9 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Usp43Q8BUM9 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC17.15■□□□□ 0.34
Usp43Q8BUM9 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Usp43Q8BUM9 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Usp43Q8BUM9 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Usp43Q8BUM9 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Usp43Q8BUM9 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Usp43Q8BUM9 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC17.15■□□□□ 0.34
Usp43Q8BUM9 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Usp43Q8BUM9 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC17.15■□□□□ 0.34
Usp43Q8BUM9 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Usp43Q8BUM9 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC17.15■□□□□ 0.34
Usp43Q8BUM9 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Usp43Q8BUM9 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Usp43Q8BUM9 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Usp43Q8BUM9 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Usp43Q8BUM9 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Usp43Q8BUM9 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Usp43Q8BUM9 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Usp43Q8BUM9 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Usp43Q8BUM9 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Usp43Q8BUM9 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Usp43Q8BUM9 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Usp43Q8BUM9 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Usp43Q8BUM9 AC154855.1-201ENSMUST00000227353 1458 ntBASIC17.14■□□□□ 0.33
Usp43Q8BUM9 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Usp43Q8BUM9 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Usp43Q8BUM9 Gm9954-202ENSMUST00000198686 4725 ntBASIC17.14■□□□□ 0.33
Usp43Q8BUM9 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Usp43Q8BUM9 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC17.14■□□□□ 0.33
Usp43Q8BUM9 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC17.14■□□□□ 0.33
Usp43Q8BUM9 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Usp43Q8BUM9 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC17.14■□□□□ 0.33
Usp43Q8BUM9 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC17.14■□□□□ 0.33
Usp43Q8BUM9 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Usp43Q8BUM9 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Usp43Q8BUM9 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Usp43Q8BUM9 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Usp43Q8BUM9 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Usp43Q8BUM9 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Usp43Q8BUM9 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Usp43Q8BUM9 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC17.13■□□□□ 0.33
Usp43Q8BUM9 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Usp43Q8BUM9 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Usp43Q8BUM9 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Usp43Q8BUM9 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Usp43Q8BUM9 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Usp43Q8BUM9 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Usp43Q8BUM9 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Usp43Q8BUM9 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Usp43Q8BUM9 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
Usp43Q8BUM9 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Usp43Q8BUM9 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Usp43Q8BUM9 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Usp43Q8BUM9 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Usp43Q8BUM9 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Usp43Q8BUM9 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Usp43Q8BUM9 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Usp43Q8BUM9 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC17.12■□□□□ 0.33
Usp43Q8BUM9 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Usp43Q8BUM9 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Usp43Q8BUM9 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC17.12■□□□□ 0.33
Usp43Q8BUM9 Gm45244-201ENSMUST00000211328 2200 ntBASIC17.12■□□□□ 0.33
Usp43Q8BUM9 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Usp43Q8BUM9 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC17.12■□□□□ 0.33
Usp43Q8BUM9 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Usp43Q8BUM9 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC17.12■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 19.8 ms