Protein–RNA interactions for Protein: Q8BR65

Suds3, Sin3 histone deacetylase corepressor complex component SDS3, mousemouse

Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Suds3Q8BR65 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Suds3Q8BR65 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Suds3Q8BR65 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Suds3Q8BR65 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Suds3Q8BR65 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC17.43■□□□□ 0.38
Suds3Q8BR65 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Suds3Q8BR65 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Suds3Q8BR65 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Suds3Q8BR65 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Suds3Q8BR65 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Suds3Q8BR65 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Suds3Q8BR65 Gm11643-201ENSMUST00000119578 864 ntBASIC17.43■□□□□ 0.38
Suds3Q8BR65 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Suds3Q8BR65 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC17.43■□□□□ 0.38
Suds3Q8BR65 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Suds3Q8BR65 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Suds3Q8BR65 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Suds3Q8BR65 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Suds3Q8BR65 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Suds3Q8BR65 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Suds3Q8BR65 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Suds3Q8BR65 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Suds3Q8BR65 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Suds3Q8BR65 Gm7292-201ENSMUST00000194706 2527 ntBASIC17.43■□□□□ 0.38
Suds3Q8BR65 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Suds3Q8BR65 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
Suds3Q8BR65 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Suds3Q8BR65 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Suds3Q8BR65 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Suds3Q8BR65 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Suds3Q8BR65 Mir8112-201ENSMUST00000184382 131 ntBASIC17.42■□□□□ 0.38
Suds3Q8BR65 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Suds3Q8BR65 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Suds3Q8BR65 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Suds3Q8BR65 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Suds3Q8BR65 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Suds3Q8BR65 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC17.42■□□□□ 0.38
Suds3Q8BR65 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Suds3Q8BR65 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Suds3Q8BR65 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC17.42■□□□□ 0.38
Suds3Q8BR65 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Suds3Q8BR65 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC17.42■□□□□ 0.38
Suds3Q8BR65 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Suds3Q8BR65 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Suds3Q8BR65 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Suds3Q8BR65 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Suds3Q8BR65 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC17.41■□□□□ 0.38
Suds3Q8BR65 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Suds3Q8BR65 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Suds3Q8BR65 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Suds3Q8BR65 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC17.41■□□□□ 0.38
Suds3Q8BR65 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Suds3Q8BR65 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Suds3Q8BR65 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC17.41■□□□□ 0.38
Suds3Q8BR65 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Suds3Q8BR65 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Suds3Q8BR65 Gm5417-201ENSMUST00000079706 384 ntBASIC17.41■□□□□ 0.38
Suds3Q8BR65 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Suds3Q8BR65 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Suds3Q8BR65 AC125311.2-201ENSMUST00000227477 1940 ntBASIC17.41■□□□□ 0.38
Suds3Q8BR65 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Suds3Q8BR65 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Suds3Q8BR65 AC124581.1-201ENSMUST00000225416 1399 ntBASIC17.4■□□□□ 0.38
Suds3Q8BR65 Gm14026-201ENSMUST00000120625 1789 ntBASIC17.4■□□□□ 0.38
Suds3Q8BR65 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Suds3Q8BR65 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Suds3Q8BR65 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Suds3Q8BR65 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Suds3Q8BR65 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Suds3Q8BR65 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Suds3Q8BR65 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Suds3Q8BR65 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Suds3Q8BR65 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Suds3Q8BR65 Gm20472-201ENSMUST00000174403 1240 ntBASIC17.4■□□□□ 0.38
Suds3Q8BR65 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Suds3Q8BR65 Gm8969-201ENSMUST00000199694 526 ntBASIC17.4■□□□□ 0.38
Suds3Q8BR65 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Suds3Q8BR65 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Suds3Q8BR65 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Suds3Q8BR65 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Suds3Q8BR65 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Suds3Q8BR65 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Suds3Q8BR65 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
Suds3Q8BR65 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Suds3Q8BR65 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.38
Suds3Q8BR65 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.38
Suds3Q8BR65 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC17.39■□□□□ 0.37
Suds3Q8BR65 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Suds3Q8BR65 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Suds3Q8BR65 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Suds3Q8BR65 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Suds3Q8BR65 CT010478.1-201ENSMUST00000220747 2787 ntBASIC17.39■□□□□ 0.37
Suds3Q8BR65 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Suds3Q8BR65 Gm15565-201ENSMUST00000118890 427 ntBASIC17.39■□□□□ 0.37
Suds3Q8BR65 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
Suds3Q8BR65 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
Suds3Q8BR65 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Suds3Q8BR65 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Suds3Q8BR65 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Suds3Q8BR65 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 14.3 ms