Protein–RNA interactions for Protein: Q8BQZ5

Cpsf4, Cleavage and polyadenylation specificity factor subunit 4, mousemouse

Known RBP Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4Q8BQZ5 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cpsf4Q8BQZ5 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cpsf4Q8BQZ5 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC16.49■□□□□ 0.23
Cpsf4Q8BQZ5 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC16.49■□□□□ 0.23
Cpsf4Q8BQZ5 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
Cpsf4Q8BQZ5 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cpsf4Q8BQZ5 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cpsf4Q8BQZ5 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC16.49■□□□□ 0.23
Cpsf4Q8BQZ5 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cpsf4Q8BQZ5 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Cpsf4Q8BQZ5 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cpsf4Q8BQZ5 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cpsf4Q8BQZ5 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cpsf4Q8BQZ5 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cpsf4Q8BQZ5 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Cpsf4Q8BQZ5 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
Cpsf4Q8BQZ5 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Cpsf4Q8BQZ5 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cpsf4Q8BQZ5 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cpsf4Q8BQZ5 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cpsf4Q8BQZ5 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cpsf4Q8BQZ5 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cpsf4Q8BQZ5 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cpsf4Q8BQZ5 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC16.48■□□□□ 0.23
Cpsf4Q8BQZ5 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cpsf4Q8BQZ5 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
Cpsf4Q8BQZ5 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cpsf4Q8BQZ5 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
Cpsf4Q8BQZ5 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
Cpsf4Q8BQZ5 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cpsf4Q8BQZ5 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cpsf4Q8BQZ5 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Cpsf4Q8BQZ5 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cpsf4Q8BQZ5 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Cpsf4Q8BQZ5 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cpsf4Q8BQZ5 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cpsf4Q8BQZ5 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cpsf4Q8BQZ5 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Cpsf4Q8BQZ5 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cpsf4Q8BQZ5 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Cpsf4Q8BQZ5 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
Cpsf4Q8BQZ5 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cpsf4Q8BQZ5 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cpsf4Q8BQZ5 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Cpsf4Q8BQZ5 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cpsf4Q8BQZ5 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cpsf4Q8BQZ5 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
Cpsf4Q8BQZ5 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Cpsf4Q8BQZ5 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cpsf4Q8BQZ5 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cpsf4Q8BQZ5 Gm43272-201ENSMUST00000200599 1584 ntBASIC16.47■□□□□ 0.23
Cpsf4Q8BQZ5 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Cpsf4Q8BQZ5 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
Cpsf4Q8BQZ5 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Cpsf4Q8BQZ5 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
Cpsf4Q8BQZ5 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Cpsf4Q8BQZ5 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
Cpsf4Q8BQZ5 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Cpsf4Q8BQZ5 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Cpsf4Q8BQZ5 Gm11643-201ENSMUST00000119578 864 ntBASIC16.46■□□□□ 0.23
Cpsf4Q8BQZ5 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Cpsf4Q8BQZ5 Gm20472-201ENSMUST00000174403 1240 ntBASIC16.46■□□□□ 0.23
Cpsf4Q8BQZ5 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Cpsf4Q8BQZ5 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Cpsf4Q8BQZ5 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Cpsf4Q8BQZ5 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Cpsf4Q8BQZ5 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Cpsf4Q8BQZ5 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Cpsf4Q8BQZ5 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Cpsf4Q8BQZ5 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC16.46■□□□□ 0.22
Cpsf4Q8BQZ5 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.22
Cpsf4Q8BQZ5 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC16.46■□□□□ 0.22
Cpsf4Q8BQZ5 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Cpsf4Q8BQZ5 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Cpsf4Q8BQZ5 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC16.45■□□□□ 0.22
Cpsf4Q8BQZ5 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Cpsf4Q8BQZ5 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Cpsf4Q8BQZ5 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Cpsf4Q8BQZ5 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Cpsf4Q8BQZ5 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Cpsf4Q8BQZ5 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Cpsf4Q8BQZ5 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Cpsf4Q8BQZ5 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Cpsf4Q8BQZ5 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Cpsf4Q8BQZ5 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Cpsf4Q8BQZ5 Gm15565-201ENSMUST00000118890 427 ntBASIC16.45■□□□□ 0.22
Cpsf4Q8BQZ5 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Cpsf4Q8BQZ5 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Cpsf4Q8BQZ5 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Cpsf4Q8BQZ5 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Cpsf4Q8BQZ5 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Cpsf4Q8BQZ5 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Cpsf4Q8BQZ5 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Cpsf4Q8BQZ5 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Cpsf4Q8BQZ5 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Cpsf4Q8BQZ5 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Cpsf4Q8BQZ5 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Cpsf4Q8BQZ5 Gm10517-202ENSMUST00000192970 758 ntBASIC16.44■□□□□ 0.22
Cpsf4Q8BQZ5 Otx2os1-204ENSMUST00000227221 751 ntBASIC16.44■□□□□ 0.22
Cpsf4Q8BQZ5 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 35.4 ms