Protein–RNA interactions for Protein: Q8BIZ0

Pcdh20, Protocadherin-20, mousemouse

Predictions only

Length 952 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh20Q8BIZ0 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdh20Q8BIZ0 Gm12382-201ENSMUST00000122005 922 ntBASIC16.56■□□□□ 0.24
Pcdh20Q8BIZ0 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdh20Q8BIZ0 Mir2861-201ENSMUST00000175539 82 ntBASIC16.56■□□□□ 0.24
Pcdh20Q8BIZ0 Gm29241-201ENSMUST00000189260 1096 ntBASIC16.56■□□□□ 0.24
Pcdh20Q8BIZ0 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC16.56■□□□□ 0.24
Pcdh20Q8BIZ0 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Pcdh20Q8BIZ0 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdh20Q8BIZ0 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Pcdh20Q8BIZ0 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Pcdh20Q8BIZ0 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdh20Q8BIZ0 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdh20Q8BIZ0 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdh20Q8BIZ0 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdh20Q8BIZ0 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdh20Q8BIZ0 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdh20Q8BIZ0 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdh20Q8BIZ0 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdh20Q8BIZ0 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdh20Q8BIZ0 Gm16401-202ENSMUST00000197463 2074 ntBASIC16.55■□□□□ 0.24
Pcdh20Q8BIZ0 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
Pcdh20Q8BIZ0 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdh20Q8BIZ0 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Pcdh20Q8BIZ0 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Pcdh20Q8BIZ0 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdh20Q8BIZ0 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdh20Q8BIZ0 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Pcdh20Q8BIZ0 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdh20Q8BIZ0 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC16.55■□□□□ 0.24
Pcdh20Q8BIZ0 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC16.55■□□□□ 0.24
Pcdh20Q8BIZ0 Gm715-201ENSMUST00000117865 831 ntBASIC16.55■□□□□ 0.24
Pcdh20Q8BIZ0 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC16.55■□□□□ 0.24
Pcdh20Q8BIZ0 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC16.55■□□□□ 0.24
Pcdh20Q8BIZ0 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
Pcdh20Q8BIZ0 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdh20Q8BIZ0 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
Pcdh20Q8BIZ0 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC16.55■□□□□ 0.24
Pcdh20Q8BIZ0 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdh20Q8BIZ0 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdh20Q8BIZ0 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdh20Q8BIZ0 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdh20Q8BIZ0 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdh20Q8BIZ0 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdh20Q8BIZ0 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdh20Q8BIZ0 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdh20Q8BIZ0 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdh20Q8BIZ0 Gm26596-201ENSMUST00000180464 2655 ntBASIC16.54■□□□□ 0.24
Pcdh20Q8BIZ0 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC16.54■□□□□ 0.24
Pcdh20Q8BIZ0 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
Pcdh20Q8BIZ0 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdh20Q8BIZ0 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdh20Q8BIZ0 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdh20Q8BIZ0 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdh20Q8BIZ0 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdh20Q8BIZ0 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Pcdh20Q8BIZ0 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdh20Q8BIZ0 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdh20Q8BIZ0 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC16.54■□□□□ 0.24
Pcdh20Q8BIZ0 AC175538.1-201ENSMUST00000225343 1269 ntBASIC16.54■□□□□ 0.24
Pcdh20Q8BIZ0 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdh20Q8BIZ0 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdh20Q8BIZ0 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC16.54■□□□□ 0.24
Pcdh20Q8BIZ0 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC16.54■□□□□ 0.24
Pcdh20Q8BIZ0 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdh20Q8BIZ0 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdh20Q8BIZ0 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdh20Q8BIZ0 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdh20Q8BIZ0 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdh20Q8BIZ0 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Pcdh20Q8BIZ0 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdh20Q8BIZ0 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdh20Q8BIZ0 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdh20Q8BIZ0 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdh20Q8BIZ0 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdh20Q8BIZ0 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdh20Q8BIZ0 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdh20Q8BIZ0 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdh20Q8BIZ0 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdh20Q8BIZ0 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdh20Q8BIZ0 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdh20Q8BIZ0 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdh20Q8BIZ0 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdh20Q8BIZ0 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdh20Q8BIZ0 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdh20Q8BIZ0 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdh20Q8BIZ0 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC16.53■□□□□ 0.24
Pcdh20Q8BIZ0 Gm37292-201ENSMUST00000192062 758 ntBASIC16.53■□□□□ 0.24
Pcdh20Q8BIZ0 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdh20Q8BIZ0 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC16.53■□□□□ 0.24
Pcdh20Q8BIZ0 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC16.53■□□□□ 0.24
Pcdh20Q8BIZ0 AC166341.7-201ENSMUST00000221698 126 ntBASIC16.53■□□□□ 0.24
Pcdh20Q8BIZ0 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdh20Q8BIZ0 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdh20Q8BIZ0 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdh20Q8BIZ0 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdh20Q8BIZ0 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Pcdh20Q8BIZ0 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC16.53■□□□□ 0.24
Pcdh20Q8BIZ0 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdh20Q8BIZ0 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC16.52■□□□□ 0.24
Pcdh20Q8BIZ0 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 20.3 ms