Protein–RNA interactions for Protein: Q8BI41

Synb, Syncytin-B, mousemouse

Predictions only

Length 618 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SynbQ8BI41 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
SynbQ8BI41 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
SynbQ8BI41 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SynbQ8BI41 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SynbQ8BI41 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SynbQ8BI41 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SynbQ8BI41 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
SynbQ8BI41 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SynbQ8BI41 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
SynbQ8BI41 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SynbQ8BI41 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SynbQ8BI41 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
SynbQ8BI41 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SynbQ8BI41 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SynbQ8BI41 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SynbQ8BI41 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC16.17■□□□□ 0.18
SynbQ8BI41 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
SynbQ8BI41 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
SynbQ8BI41 Gm10418-201ENSMUST00000100943 576 ntBASIC16.17■□□□□ 0.18
SynbQ8BI41 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC16.17■□□□□ 0.18
SynbQ8BI41 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SynbQ8BI41 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC16.17■□□□□ 0.18
SynbQ8BI41 Gm43213-201ENSMUST00000151866 1790 ntBASIC16.17■□□□□ 0.18
SynbQ8BI41 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SynbQ8BI41 CT010478.1-201ENSMUST00000220747 2787 ntBASIC16.17■□□□□ 0.18
SynbQ8BI41 Gm45906-201ENSMUST00000208911 1430 ntBASIC16.17■□□□□ 0.18
SynbQ8BI41 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC16.17■□□□□ 0.18
SynbQ8BI41 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SynbQ8BI41 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
SynbQ8BI41 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SynbQ8BI41 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SynbQ8BI41 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SynbQ8BI41 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SynbQ8BI41 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
SynbQ8BI41 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SynbQ8BI41 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SynbQ8BI41 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SynbQ8BI41 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
SynbQ8BI41 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
SynbQ8BI41 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SynbQ8BI41 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC16.16■□□□□ 0.18
SynbQ8BI41 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SynbQ8BI41 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
SynbQ8BI41 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
SynbQ8BI41 Gm17661-201ENSMUST00000170317 270 ntBASIC16.16■□□□□ 0.18
SynbQ8BI41 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC16.16■□□□□ 0.18
SynbQ8BI41 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SynbQ8BI41 Gm4217-201ENSMUST00000182243 1002 ntBASIC16.16■□□□□ 0.18
SynbQ8BI41 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC16.16■□□□□ 0.18
SynbQ8BI41 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SynbQ8BI41 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC16.16■□□□□ 0.18
SynbQ8BI41 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SynbQ8BI41 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SynbQ8BI41 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SynbQ8BI41 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
SynbQ8BI41 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SynbQ8BI41 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SynbQ8BI41 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC16.15■□□□□ 0.18
SynbQ8BI41 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
SynbQ8BI41 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
SynbQ8BI41 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
SynbQ8BI41 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
SynbQ8BI41 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC16.15■□□□□ 0.18
SynbQ8BI41 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SynbQ8BI41 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SynbQ8BI41 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC16.15■□□□□ 0.18
SynbQ8BI41 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SynbQ8BI41 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SynbQ8BI41 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC16.15■□□□□ 0.18
SynbQ8BI41 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SynbQ8BI41 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SynbQ8BI41 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SynbQ8BI41 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
SynbQ8BI41 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
SynbQ8BI41 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SynbQ8BI41 Gm43338-201ENSMUST00000198617 2223 ntBASIC16.14■□□□□ 0.17
SynbQ8BI41 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC16.14■□□□□ 0.17
SynbQ8BI41 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SynbQ8BI41 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SynbQ8BI41 Gm7284-201ENSMUST00000131667 944 ntBASIC16.14■□□□□ 0.17
SynbQ8BI41 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC16.14■□□□□ 0.17
SynbQ8BI41 AC154471.1-201ENSMUST00000224418 436 ntBASIC16.14■□□□□ 0.17
SynbQ8BI41 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SynbQ8BI41 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SynbQ8BI41 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC16.14■□□□□ 0.17
SynbQ8BI41 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
SynbQ8BI41 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
SynbQ8BI41 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SynbQ8BI41 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
SynbQ8BI41 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SynbQ8BI41 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
SynbQ8BI41 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SynbQ8BI41 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SynbQ8BI41 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
SynbQ8BI41 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SynbQ8BI41 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
SynbQ8BI41 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
SynbQ8BI41 Gm7638-201ENSMUST00000121348 967 ntBASIC16.13■□□□□ 0.17
SynbQ8BI41 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
SynbQ8BI41 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC16.13■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms