Protein–RNA interactions for Protein: Q8BFW4

Trim65, Tripartite motif-containing protein 65, mousemouse

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim65Q8BFW4 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trim65Q8BFW4 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trim65Q8BFW4 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Trim65Q8BFW4 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
Trim65Q8BFW4 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC18.18■□□□□ 0.5
Trim65Q8BFW4 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Trim65Q8BFW4 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trim65Q8BFW4 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trim65Q8BFW4 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trim65Q8BFW4 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC18.18■□□□□ 0.5
Trim65Q8BFW4 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Trim65Q8BFW4 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trim65Q8BFW4 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trim65Q8BFW4 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trim65Q8BFW4 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trim65Q8BFW4 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trim65Q8BFW4 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Trim65Q8BFW4 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trim65Q8BFW4 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Trim65Q8BFW4 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Trim65Q8BFW4 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trim65Q8BFW4 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trim65Q8BFW4 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC18.17■□□□□ 0.5
Trim65Q8BFW4 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trim65Q8BFW4 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC18.17■□□□□ 0.5
Trim65Q8BFW4 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trim65Q8BFW4 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC18.17■□□□□ 0.5
Trim65Q8BFW4 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trim65Q8BFW4 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trim65Q8BFW4 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC18.17■□□□□ 0.5
Trim65Q8BFW4 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trim65Q8BFW4 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trim65Q8BFW4 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Trim65Q8BFW4 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trim65Q8BFW4 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trim65Q8BFW4 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trim65Q8BFW4 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trim65Q8BFW4 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Trim65Q8BFW4 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trim65Q8BFW4 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trim65Q8BFW4 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Trim65Q8BFW4 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trim65Q8BFW4 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trim65Q8BFW4 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trim65Q8BFW4 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trim65Q8BFW4 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trim65Q8BFW4 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trim65Q8BFW4 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trim65Q8BFW4 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
Trim65Q8BFW4 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trim65Q8BFW4 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trim65Q8BFW4 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC18.16■□□□□ 0.5
Trim65Q8BFW4 Gm37055-201ENSMUST00000191866 133 ntBASIC18.16■□□□□ 0.5
Trim65Q8BFW4 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC18.16■□□□□ 0.5
Trim65Q8BFW4 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC18.16■□□□□ 0.5
Trim65Q8BFW4 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trim65Q8BFW4 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trim65Q8BFW4 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trim65Q8BFW4 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Trim65Q8BFW4 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Trim65Q8BFW4 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trim65Q8BFW4 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trim65Q8BFW4 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trim65Q8BFW4 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC18.15■□□□□ 0.5
Trim65Q8BFW4 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trim65Q8BFW4 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trim65Q8BFW4 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trim65Q8BFW4 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trim65Q8BFW4 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC18.15■□□□□ 0.5
Trim65Q8BFW4 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC18.15■□□□□ 0.5
Trim65Q8BFW4 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC18.15■□□□□ 0.5
Trim65Q8BFW4 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC18.15■□□□□ 0.5
Trim65Q8BFW4 Gm27000-201ENSMUST00000182943 842 ntBASIC18.15■□□□□ 0.5
Trim65Q8BFW4 Gm27463-201ENSMUST00000183569 57 ntBASIC18.15■□□□□ 0.5
Trim65Q8BFW4 Gm43353-201ENSMUST00000199224 1295 ntBASIC18.15■□□□□ 0.5
Trim65Q8BFW4 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC18.15■□□□□ 0.5
Trim65Q8BFW4 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trim65Q8BFW4 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trim65Q8BFW4 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trim65Q8BFW4 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trim65Q8BFW4 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Trim65Q8BFW4 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trim65Q8BFW4 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trim65Q8BFW4 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trim65Q8BFW4 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC18.15■□□□□ 0.5
Trim65Q8BFW4 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC18.14■□□□□ 0.5
Trim65Q8BFW4 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trim65Q8BFW4 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trim65Q8BFW4 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
Trim65Q8BFW4 AL590614.2-201ENSMUST00000225374 1937 ntBASIC18.14■□□□□ 0.49
Trim65Q8BFW4 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trim65Q8BFW4 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trim65Q8BFW4 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trim65Q8BFW4 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Trim65Q8BFW4 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trim65Q8BFW4 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trim65Q8BFW4 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trim65Q8BFW4 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trim65Q8BFW4 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trim65Q8BFW4 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms