Protein–RNA interactions for Protein: Q810I2

Trim50, E3 ubiquitin-protein ligase TRIM50, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim50Q810I2 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trim50Q810I2 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trim50Q810I2 Gm5417-201ENSMUST00000079706 384 ntBASIC16.54■□□□□ 0.24
Trim50Q810I2 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trim50Q810I2 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Trim50Q810I2 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trim50Q810I2 Tfap2a-209ENSMUST00000225180 1828 ntBASIC16.54■□□□□ 0.24
Trim50Q810I2 Gm43294-201ENSMUST00000202850 2490 ntBASIC16.54■□□□□ 0.24
Trim50Q810I2 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Trim50Q810I2 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trim50Q810I2 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Trim50Q810I2 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Trim50Q810I2 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trim50Q810I2 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trim50Q810I2 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Trim50Q810I2 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trim50Q810I2 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Trim50Q810I2 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trim50Q810I2 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Trim50Q810I2 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
Trim50Q810I2 AC135963.1-201ENSMUST00000211640 717 ntBASIC16.53■□□□□ 0.24
Trim50Q810I2 Il3ra-202ENSMUST00000223589 738 ntBASIC16.53■□□□□ 0.24
Trim50Q810I2 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trim50Q810I2 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC16.53■□□□□ 0.24
Trim50Q810I2 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trim50Q810I2 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
Trim50Q810I2 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
Trim50Q810I2 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Trim50Q810I2 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trim50Q810I2 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trim50Q810I2 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
Trim50Q810I2 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC16.52■□□□□ 0.24
Trim50Q810I2 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trim50Q810I2 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Trim50Q810I2 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC16.52■□□□□ 0.24
Trim50Q810I2 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC16.52■□□□□ 0.24
Trim50Q810I2 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC16.52■□□□□ 0.24
Trim50Q810I2 Gm7791-201ENSMUST00000219066 539 ntBASIC16.52■□□□□ 0.24
Trim50Q810I2 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trim50Q810I2 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trim50Q810I2 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trim50Q810I2 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Trim50Q810I2 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trim50Q810I2 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
Trim50Q810I2 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Trim50Q810I2 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC16.52■□□□□ 0.23
Trim50Q810I2 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Trim50Q810I2 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC16.52■□□□□ 0.23
Trim50Q810I2 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Trim50Q810I2 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Trim50Q810I2 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trim50Q810I2 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trim50Q810I2 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trim50Q810I2 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trim50Q810I2 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trim50Q810I2 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Trim50Q810I2 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Trim50Q810I2 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trim50Q810I2 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trim50Q810I2 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC16.51■□□□□ 0.23
Trim50Q810I2 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trim50Q810I2 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
Trim50Q810I2 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trim50Q810I2 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trim50Q810I2 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trim50Q810I2 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trim50Q810I2 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trim50Q810I2 Gm15635-204ENSMUST00000208024 2539 ntBASIC16.51■□□□□ 0.23
Trim50Q810I2 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trim50Q810I2 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Trim50Q810I2 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Trim50Q810I2 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC16.51■□□□□ 0.23
Trim50Q810I2 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Trim50Q810I2 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trim50Q810I2 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trim50Q810I2 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC16.5■□□□□ 0.23
Trim50Q810I2 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trim50Q810I2 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trim50Q810I2 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Trim50Q810I2 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Trim50Q810I2 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trim50Q810I2 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trim50Q810I2 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trim50Q810I2 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trim50Q810I2 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC16.5■□□□□ 0.23
Trim50Q810I2 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Trim50Q810I2 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trim50Q810I2 AC120002.2-201ENSMUST00000220205 773 ntBASIC16.5■□□□□ 0.23
Trim50Q810I2 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Trim50Q810I2 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trim50Q810I2 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Trim50Q810I2 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trim50Q810I2 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trim50Q810I2 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trim50Q810I2 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC16.5■□□□□ 0.23
Trim50Q810I2 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trim50Q810I2 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trim50Q810I2 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trim50Q810I2 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trim50Q810I2 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms