Protein–RNA interactions for Protein: Q80X53

Ccdc116, Coiled-coil domain-containing protein 116, mousemouse

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc116Q80X53 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC16.58■□□□□ 0.24
Ccdc116Q80X53 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ccdc116Q80X53 Gm27000-201ENSMUST00000182943 842 ntBASIC16.58■□□□□ 0.24
Ccdc116Q80X53 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC16.58■□□□□ 0.24
Ccdc116Q80X53 Otx2os1-204ENSMUST00000227221 751 ntBASIC16.58■□□□□ 0.24
Ccdc116Q80X53 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ccdc116Q80X53 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ccdc116Q80X53 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ccdc116Q80X53 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ccdc116Q80X53 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ccdc116Q80X53 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ccdc116Q80X53 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
Ccdc116Q80X53 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
Ccdc116Q80X53 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ccdc116Q80X53 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ccdc116Q80X53 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ccdc116Q80X53 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ccdc116Q80X53 Hivep3-201ENSMUST00000084306 2973 ntBASIC16.57■□□□□ 0.24
Ccdc116Q80X53 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ccdc116Q80X53 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ccdc116Q80X53 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Ccdc116Q80X53 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Ccdc116Q80X53 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Ccdc116Q80X53 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ccdc116Q80X53 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ccdc116Q80X53 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Ccdc116Q80X53 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Ccdc116Q80X53 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ccdc116Q80X53 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC16.57■□□□□ 0.24
Ccdc116Q80X53 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Ccdc116Q80X53 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC16.57■□□□□ 0.24
Ccdc116Q80X53 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Ccdc116Q80X53 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Ccdc116Q80X53 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC16.57■□□□□ 0.24
Ccdc116Q80X53 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ccdc116Q80X53 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ccdc116Q80X53 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ccdc116Q80X53 AC122335.2-201ENSMUST00000213901 6181 ntBASIC16.57■□□□□ 0.24
Ccdc116Q80X53 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ccdc116Q80X53 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ccdc116Q80X53 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Ccdc116Q80X53 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC16.57■□□□□ 0.24
Ccdc116Q80X53 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ccdc116Q80X53 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC16.57■□□□□ 0.24
Ccdc116Q80X53 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ccdc116Q80X53 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Ccdc116Q80X53 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Ccdc116Q80X53 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ccdc116Q80X53 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC16.57■□□□□ 0.24
Ccdc116Q80X53 Gm28265-201ENSMUST00000188201 2319 ntBASIC16.57■□□□□ 0.24
Ccdc116Q80X53 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ccdc116Q80X53 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Ccdc116Q80X53 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ccdc116Q80X53 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Ccdc116Q80X53 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Ccdc116Q80X53 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Ccdc116Q80X53 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ccdc116Q80X53 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ccdc116Q80X53 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ccdc116Q80X53 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ccdc116Q80X53 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ccdc116Q80X53 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Ccdc116Q80X53 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ccdc116Q80X53 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Ccdc116Q80X53 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ccdc116Q80X53 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ccdc116Q80X53 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ccdc116Q80X53 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC16.56■□□□□ 0.24
Ccdc116Q80X53 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ccdc116Q80X53 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Ccdc116Q80X53 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Ccdc116Q80X53 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ccdc116Q80X53 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Ccdc116Q80X53 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Ccdc116Q80X53 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ccdc116Q80X53 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ccdc116Q80X53 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
Ccdc116Q80X53 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ccdc116Q80X53 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ccdc116Q80X53 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ccdc116Q80X53 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ccdc116Q80X53 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ccdc116Q80X53 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ccdc116Q80X53 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ccdc116Q80X53 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Ccdc116Q80X53 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ccdc116Q80X53 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ccdc116Q80X53 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Ccdc116Q80X53 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC16.55■□□□□ 0.24
Ccdc116Q80X53 Il3ra-202ENSMUST00000223589 738 ntBASIC16.55■□□□□ 0.24
Ccdc116Q80X53 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ccdc116Q80X53 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ccdc116Q80X53 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ccdc116Q80X53 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ccdc116Q80X53 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Ccdc116Q80X53 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ccdc116Q80X53 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Ccdc116Q80X53 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ccdc116Q80X53 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Ccdc116Q80X53 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms