Protein–RNA interactions for Protein: Q80WR1

Tspan18, Tetraspanin-18, mousemouse

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tspan18Q80WR1 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Tspan18Q80WR1 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Tspan18Q80WR1 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Tspan18Q80WR1 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Tspan18Q80WR1 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Tspan18Q80WR1 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Tspan18Q80WR1 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Tspan18Q80WR1 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Tspan18Q80WR1 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Tspan18Q80WR1 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Tspan18Q80WR1 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Tspan18Q80WR1 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
Tspan18Q80WR1 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Tspan18Q80WR1 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
Tspan18Q80WR1 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Tspan18Q80WR1 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
Tspan18Q80WR1 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
Tspan18Q80WR1 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Tspan18Q80WR1 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Tspan18Q80WR1 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC18.02■□□□□ 0.47
Tspan18Q80WR1 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC18.02■□□□□ 0.47
Tspan18Q80WR1 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
Tspan18Q80WR1 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Tspan18Q80WR1 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Tspan18Q80WR1 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Tspan18Q80WR1 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Tspan18Q80WR1 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
Tspan18Q80WR1 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Tspan18Q80WR1 Mir770-201ENSMUST00000103252 94 ntBASIC18.01■□□□□ 0.47
Tspan18Q80WR1 Gm17808-201ENSMUST00000200859 894 ntBASIC18.01■□□□□ 0.47
Tspan18Q80WR1 Gm45328-201ENSMUST00000210942 917 ntBASIC18.01■□□□□ 0.47
Tspan18Q80WR1 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Tspan18Q80WR1 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Tspan18Q80WR1 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
Tspan18Q80WR1 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Tspan18Q80WR1 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Tspan18Q80WR1 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Tspan18Q80WR1 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Tspan18Q80WR1 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Tspan18Q80WR1 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Tspan18Q80WR1 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Tspan18Q80WR1 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC18■□□□□ 0.47
Tspan18Q80WR1 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Tspan18Q80WR1 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC18■□□□□ 0.47
Tspan18Q80WR1 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC18■□□□□ 0.47
Tspan18Q80WR1 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC18■□□□□ 0.47
Tspan18Q80WR1 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC18■□□□□ 0.47
Tspan18Q80WR1 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC18■□□□□ 0.47
Tspan18Q80WR1 AC130671.1-201ENSMUST00000227384 1237 ntBASIC18■□□□□ 0.47
Tspan18Q80WR1 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Tspan18Q80WR1 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC18■□□□□ 0.47
Tspan18Q80WR1 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Tspan18Q80WR1 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Tspan18Q80WR1 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Tspan18Q80WR1 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Tspan18Q80WR1 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Tspan18Q80WR1 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Tspan18Q80WR1 Zfp264-201ENSMUST00000208656 1563 ntBASIC18■□□□□ 0.47
Tspan18Q80WR1 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC17.99■□□□□ 0.47
Tspan18Q80WR1 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Tspan18Q80WR1 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
Tspan18Q80WR1 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Tspan18Q80WR1 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
Tspan18Q80WR1 Gm6623-201ENSMUST00000173570 544 ntBASIC17.99■□□□□ 0.47
Tspan18Q80WR1 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Tspan18Q80WR1 AC154471.1-201ENSMUST00000224418 436 ntBASIC17.99■□□□□ 0.47
Tspan18Q80WR1 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
Tspan18Q80WR1 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Tspan18Q80WR1 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Tspan18Q80WR1 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Tspan18Q80WR1 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Tspan18Q80WR1 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC17.98■□□□□ 0.47
Tspan18Q80WR1 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Tspan18Q80WR1 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Tspan18Q80WR1 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Tspan18Q80WR1 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
Tspan18Q80WR1 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Tspan18Q80WR1 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
Tspan18Q80WR1 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC17.98■□□□□ 0.47
Tspan18Q80WR1 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC17.98■□□□□ 0.47
Tspan18Q80WR1 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Tspan18Q80WR1 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
Tspan18Q80WR1 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Tspan18Q80WR1 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
Tspan18Q80WR1 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Tspan18Q80WR1 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
Tspan18Q80WR1 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Tspan18Q80WR1 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Tspan18Q80WR1 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC17.98■□□□□ 0.47
Tspan18Q80WR1 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Tspan18Q80WR1 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Tspan18Q80WR1 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Tspan18Q80WR1 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Tspan18Q80WR1 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Tspan18Q80WR1 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Tspan18Q80WR1 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Tspan18Q80WR1 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Tspan18Q80WR1 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Tspan18Q80WR1 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Tspan18Q80WR1 Ighv6-1-201ENSMUST00000193612 343 ntBASIC17.97■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 39.1 ms