Protein–RNA interactions for Protein: Q80UU2

Rpp38, Ribonuclease P protein subunit p38, mousemouse

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpp38Q80UU2 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rpp38Q80UU2 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rpp38Q80UU2 Gm15565-201ENSMUST00000118890 427 ntBASIC16.92■□□□□ 0.3
Rpp38Q80UU2 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC16.92■□□□□ 0.3
Rpp38Q80UU2 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC16.92■□□□□ 0.3
Rpp38Q80UU2 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC16.92■□□□□ 0.3
Rpp38Q80UU2 AC159205.6-201ENSMUST00000224935 887 ntBASIC16.92■□□□□ 0.3
Rpp38Q80UU2 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rpp38Q80UU2 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Rpp38Q80UU2 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Rpp38Q80UU2 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rpp38Q80UU2 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rpp38Q80UU2 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rpp38Q80UU2 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Rpp38Q80UU2 Spsb2-203ENSMUST00000112473 1322 ntBASIC16.92■□□□□ 0.3
Rpp38Q80UU2 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rpp38Q80UU2 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Rpp38Q80UU2 Wnt10b-204ENSMUST00000226655 1807 ntBASIC16.91■□□□□ 0.3
Rpp38Q80UU2 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Rpp38Q80UU2 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Rpp38Q80UU2 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rpp38Q80UU2 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rpp38Q80UU2 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Rpp38Q80UU2 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rpp38Q80UU2 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rpp38Q80UU2 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rpp38Q80UU2 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC16.91■□□□□ 0.3
Rpp38Q80UU2 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Rpp38Q80UU2 Mir6982-201ENSMUST00000184354 68 ntBASIC16.91■□□□□ 0.3
Rpp38Q80UU2 Gm29994-201ENSMUST00000195495 1193 ntBASIC16.91■□□□□ 0.3
Rpp38Q80UU2 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC16.91■□□□□ 0.3
Rpp38Q80UU2 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC16.91■□□□□ 0.3
Rpp38Q80UU2 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rpp38Q80UU2 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rpp38Q80UU2 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC16.91■□□□□ 0.3
Rpp38Q80UU2 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Rpp38Q80UU2 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rpp38Q80UU2 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rpp38Q80UU2 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rpp38Q80UU2 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rpp38Q80UU2 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rpp38Q80UU2 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Rpp38Q80UU2 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC16.91■□□□□ 0.3
Rpp38Q80UU2 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Rpp38Q80UU2 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rpp38Q80UU2 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rpp38Q80UU2 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC16.9■□□□□ 0.3
Rpp38Q80UU2 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rpp38Q80UU2 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rpp38Q80UU2 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC16.9■□□□□ 0.3
Rpp38Q80UU2 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Rpp38Q80UU2 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC16.9■□□□□ 0.3
Rpp38Q80UU2 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC16.9■□□□□ 0.3
Rpp38Q80UU2 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC16.9■□□□□ 0.3
Rpp38Q80UU2 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rpp38Q80UU2 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rpp38Q80UU2 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC16.9■□□□□ 0.3
Rpp38Q80UU2 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rpp38Q80UU2 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
Rpp38Q80UU2 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
Rpp38Q80UU2 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Rpp38Q80UU2 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Rpp38Q80UU2 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Rpp38Q80UU2 Gm8668-201ENSMUST00000120559 1447 ntBASIC16.89■□□□□ 0.29
Rpp38Q80UU2 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Rpp38Q80UU2 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Rpp38Q80UU2 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
Rpp38Q80UU2 Gm13186-201ENSMUST00000118031 316 ntBASIC16.89■□□□□ 0.29
Rpp38Q80UU2 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Rpp38Q80UU2 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Rpp38Q80UU2 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Rpp38Q80UU2 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Rpp38Q80UU2 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Rpp38Q80UU2 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Rpp38Q80UU2 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Rpp38Q80UU2 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Rpp38Q80UU2 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
Rpp38Q80UU2 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Rpp38Q80UU2 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Rpp38Q80UU2 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Rpp38Q80UU2 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Rpp38Q80UU2 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Rpp38Q80UU2 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Rpp38Q80UU2 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Rpp38Q80UU2 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Rpp38Q80UU2 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Rpp38Q80UU2 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Rpp38Q80UU2 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Rpp38Q80UU2 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Rpp38Q80UU2 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC16.88■□□□□ 0.29
Rpp38Q80UU2 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Rpp38Q80UU2 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC16.88■□□□□ 0.29
Rpp38Q80UU2 Gm7889-201ENSMUST00000185591 958 ntBASIC16.88■□□□□ 0.29
Rpp38Q80UU2 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Rpp38Q80UU2 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
Rpp38Q80UU2 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Rpp38Q80UU2 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Rpp38Q80UU2 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC16.88■□□□□ 0.29
Rpp38Q80UU2 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Rpp38Q80UU2 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms