Protein–RNA interactions for Protein: Q80U87

Usp8, Ubiquitin carboxyl-terminal hydrolase 8, mousemouse

Predictions only

Length 1,080 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp8Q80U87 Gm18666-201ENSMUST00000190039 958 ntBASIC17.03■□□□□ 0.32
Usp8Q80U87 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Usp8Q80U87 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Usp8Q80U87 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Usp8Q80U87 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC17.03■□□□□ 0.32
Usp8Q80U87 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Usp8Q80U87 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Usp8Q80U87 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Usp8Q80U87 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC17.03■□□□□ 0.32
Usp8Q80U87 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Usp8Q80U87 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC17.03■□□□□ 0.32
Usp8Q80U87 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Usp8Q80U87 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Usp8Q80U87 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
Usp8Q80U87 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Usp8Q80U87 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Usp8Q80U87 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Usp8Q80U87 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
Usp8Q80U87 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC17.02■□□□□ 0.32
Usp8Q80U87 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
Usp8Q80U87 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
Usp8Q80U87 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Usp8Q80U87 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Usp8Q80U87 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Usp8Q80U87 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Usp8Q80U87 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
Usp8Q80U87 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
Usp8Q80U87 Gm12527-201ENSMUST00000117967 564 ntBASIC17.02■□□□□ 0.32
Usp8Q80U87 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Usp8Q80U87 Gm6576-201ENSMUST00000169678 883 ntBASIC17.02■□□□□ 0.32
Usp8Q80U87 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Usp8Q80U87 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
Usp8Q80U87 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Usp8Q80U87 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Usp8Q80U87 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Usp8Q80U87 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Usp8Q80U87 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Usp8Q80U87 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Usp8Q80U87 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Usp8Q80U87 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Usp8Q80U87 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Usp8Q80U87 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Usp8Q80U87 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Usp8Q80U87 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Usp8Q80U87 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC17.01■□□□□ 0.31
Usp8Q80U87 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Usp8Q80U87 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Usp8Q80U87 Gm18025-201ENSMUST00000221733 862 ntBASIC17.01■□□□□ 0.31
Usp8Q80U87 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
Usp8Q80U87 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Usp8Q80U87 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Usp8Q80U87 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Usp8Q80U87 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Usp8Q80U87 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Usp8Q80U87 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Usp8Q80U87 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Usp8Q80U87 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC17.01■□□□□ 0.31
Usp8Q80U87 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
Usp8Q80U87 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Usp8Q80U87 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Usp8Q80U87 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC17■□□□□ 0.31
Usp8Q80U87 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC17■□□□□ 0.31
Usp8Q80U87 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC17■□□□□ 0.31
Usp8Q80U87 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC17■□□□□ 0.31
Usp8Q80U87 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC17■□□□□ 0.31
Usp8Q80U87 AC166341.7-201ENSMUST00000221698 126 ntBASIC17■□□□□ 0.31
Usp8Q80U87 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC17■□□□□ 0.31
Usp8Q80U87 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Usp8Q80U87 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC17■□□□□ 0.31
Usp8Q80U87 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Usp8Q80U87 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Usp8Q80U87 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Usp8Q80U87 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
Usp8Q80U87 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Usp8Q80U87 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC17■□□□□ 0.31
Usp8Q80U87 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Usp8Q80U87 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Usp8Q80U87 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Usp8Q80U87 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Usp8Q80U87 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Usp8Q80U87 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Usp8Q80U87 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Usp8Q80U87 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
Usp8Q80U87 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Usp8Q80U87 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Usp8Q80U87 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
Usp8Q80U87 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Usp8Q80U87 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Usp8Q80U87 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Usp8Q80U87 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
Usp8Q80U87 Gm37856-201ENSMUST00000191634 999 ntBASIC16.99■□□□□ 0.31
Usp8Q80U87 Trmt13-210ENSMUST00000198454 880 ntBASIC16.99■□□□□ 0.31
Usp8Q80U87 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
Usp8Q80U87 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC16.99■□□□□ 0.31
Usp8Q80U87 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Usp8Q80U87 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Usp8Q80U87 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
Usp8Q80U87 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Usp8Q80U87 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Usp8Q80U87 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC16.99■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms